RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 AGXT2Q9BYV1 514 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 ARMT1Q9H993 441 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 MYH2Q9UKX2 1941 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 H7C1D1 291 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 PPARAQ07869 468 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 APOBEC3HQ6NTF7 200 aaKnown RBP12.43□□□□□ -0.42
GABRB3-213ENST00000557765 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-213ENST00000557765 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
GABRB3-213ENST00000557765 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
GABRB3-213ENST00000557765 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 E7EWF7 191 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 FOXP2O15409 715 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 DHX16O60231 1041 aaKnown RBP12.42□□□□□ -0.42
GABRB3-213ENST00000557765 RPS6KB1P23443 525 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 LIFRP42702 1097 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 NEK4P51957 841 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 EVCP57679 992 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 C12orf60Q5U649 245 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
GABRB3-213ENST00000557765 HERC5Q9UII4 1024 aaKnown RBP12.42□□□□□ -0.42
GABRB3-213ENST00000557765 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
GABRB3-213ENST00000557765 FLT1P17948 1338 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 ERICH2A1L162 156 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 IQCA1LA6NCM1 817 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 K7ELQ4 463 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 ZBED3Q96IU2 234 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 CCDC17Q96LX7 622 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 TTC14Q96N46 770 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
GABRB3-213ENST00000557765 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 USP40Q9NVE5 1235 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 PI4KBQ9UBF8 816 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 LIMCH1Q9UPQ0 1083 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 SCN9AQ15858 1988 aa12.41□□□□□ -0.42
GABRB3-213ENST00000557765 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 USP17L21D6R901 530 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 TBC1D12O60347 775 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 RAD17O75943 681 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 GPR162Q16538 588 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 APOBEC3FQ8IUX4 373 aaKnown RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-213ENST00000557765 MYOZ2Q9NPC6 264 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
GABRB3-213ENST00000557765 LAMB1P07942 1786 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 CALM1P0DP23 149 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 CALM2P0DP24 149 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 CALM3P0DP25 149 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 FGD1P98174 961 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 C16orf86Q6ZW13 317 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 MAP3K14Q99558 947 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 SERPINB13Q9UIV8 391 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 SBF1O95248 1867 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
GABRB3-213ENST00000557765 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
GABRB3-213ENST00000557765 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms