RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 BEGAINQ9BUH8 593 aa27.79■■■□□ 2.04
TDP1-216ENST00000556867 MAP3K9P80192 1104 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 PICALMQ13492 652 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 SPRYD7Q5W111 196 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.78■■■□□ 2.04
TDP1-216ENST00000556867 SH3BP5LQ7L8J4 393 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 TEX11Q8IYF3 940 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 GPATCH3Q96I76 525 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 ZNF341Q9BYN7 854 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 PAG1Q9NWQ8 432 aa27.78■■■□□ 2.04
TDP1-216ENST00000556867 EDC3Q96F86 508 aaKnown RBP27.77■■■□□ 2.04
TDP1-216ENST00000556867 CSRNP1Q96S65 589 aa27.77■■■□□ 2.04
TDP1-216ENST00000556867 CA12O43570 354 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 ZBTB48P10074 688 aaPredicted RBP27.76■■■□□ 2.03
TDP1-216ENST00000556867 CTCFP49711 727 aaPredicted RBP27.76■■■□□ 2.03
TDP1-216ENST00000556867 VGLL4Q14135 290 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 CERS3Q8IU89 383 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 WNK4Q96J92 1243 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 WRNIP1Q96S55 665 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 MYH7P12883 1935 aa27.76■■■□□ 2.03
TDP1-216ENST00000556867 DDTLA6NHG4 134 aaPredicted RBP27.75■■■□□ 2.03
TDP1-216ENST00000556867 PDE6AP16499 860 aa27.75■■■□□ 2.03
TDP1-216ENST00000556867 MIGA2Q7L4E1 593 aa27.75■■■□□ 2.03
TDP1-216ENST00000556867 ZSCAN29Q8IWY8 852 aaPredicted RBP27.75■■■□□ 2.03
TDP1-216ENST00000556867 OSBPL5Q9H0X9 879 aaPredicted RBP27.75■■■□□ 2.03
TDP1-216ENST00000556867 CSADQ9Y600 493 aa27.75■■■□□ 2.03
TDP1-216ENST00000556867 SLC9C2Q5TAH2 1124 aa27.74■■■□□ 2.03
TDP1-216ENST00000556867 RWDD1Q9H446 243 aaPredicted RBP27.74■■■□□ 2.03
TDP1-216ENST00000556867 ZNF112Q9UJU3 913 aa27.74■■■□□ 2.03
TDP1-216ENST00000556867 DYNLL1P63167 89 aaKnown RBP27.73■■■□□ 2.03
TDP1-216ENST00000556867 MKRN3Q13064 507 aaKnown RBP27.73■■■□□ 2.03
TDP1-216ENST00000556867 ELP3Q9H9T3 547 aa27.73■■■□□ 2.03
TDP1-216ENST00000556867 TTC41PQ6P2S7 1318 aa27.72■■■□□ 2.03
TDP1-216ENST00000556867 HSPA8P11142 646 aaKnown RBP27.72■■■□□ 2.03
TDP1-216ENST00000556867 MAP3K10Q02779 954 aa27.72■■■□□ 2.03
TDP1-216ENST00000556867 ANKRD45Q5TZF3 282 aa27.72■■■□□ 2.03
TDP1-216ENST00000556867 MIGA1Q8NAN2 632 aa27.72■■■□□ 2.03
TDP1-216ENST00000556867 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.72■■■□□ 2.03
TDP1-216ENST00000556867 ZBTB47Q9UFB7 747 aaPredicted RBP27.72■■■□□ 2.03
TDP1-216ENST00000556867 SNCAIPQ9Y6H5 919 aa27.72■■■□□ 2.03
TDP1-216ENST00000556867 TCRBV5S4A2TA0A5A2 114 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 GJA5P36382 358 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 SREBF2Q12772 1141 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 TSHZ3Q63HK5 1081 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 SMC5Q8IY18 1101 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 TGFBRAP1Q8WUH2 860 aa27.71■■■□□ 2.03
TDP1-216ENST00000556867 FLT1P17948 1338 aa27.7■■■□□ 2.03
TDP1-216ENST00000556867 ZNF532Q9HCE3 1301 aa27.7■■■□□ 2.03
TDP1-216ENST00000556867 TM4SF4P48230 202 aa27.7■■■□□ 2.02
TDP1-216ENST00000556867 OTUD7AQ8TE49 926 aaPredicted RBP27.7■■■□□ 2.02
TDP1-216ENST00000556867 ZKSCAN4Q969J2 545 aaPredicted RBP27.7■■■□□ 2.02
TDP1-216ENST00000556867 OPTNQ96CV9 577 aa27.7■■■□□ 2.02
TDP1-216ENST00000556867 RIOK1Q9BRS2 568 aaKnown RBP27.7■■■□□ 2.02
TDP1-216ENST00000556867 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.7■■■□□ 2.02
TDP1-216ENST00000556867 SAGE1Q9NXZ1 904 aa27.7■■■□□ 2.02
TDP1-216ENST00000556867 SALL3Q9BXA9 1300 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 MANSC4A6NHS7 340 aaPredicted RBP27.69■■■□□ 2.02
TDP1-216ENST00000556867 SPDYE5A6NIY4 337 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 INPP5BP32019 993 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 ADD2P35612 726 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 MAPKAPK5Q8IW41 473 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 SIPA1L1O43166 1804 aa27.69■■■□□ 2.02
TDP1-216ENST00000556867 ERC2O15083 957 aa27.68■■■□□ 2.02
TDP1-216ENST00000556867 TBC1D12O60347 775 aa27.68■■■□□ 2.02
TDP1-216ENST00000556867 MX1P20591 662 aa27.68■■■□□ 2.02
TDP1-216ENST00000556867 IRX6P78412 446 aaPredicted RBP27.68■■■□□ 2.02
TDP1-216ENST00000556867 NOL9Q5SY16 702 aaKnown RBP27.68■■■□□ 2.02
TDP1-216ENST00000556867 DHX36Q9H2U1 1008 aaKnown RBP27.68■■■□□ 2.02
TDP1-216ENST00000556867 PRDM10Q9NQV6 1147 aa27.68■■■□□ 2.02
TDP1-216ENST00000556867 RNF186Q9NXI6 227 aa27.68■■■□□ 2.02
TDP1-216ENST00000556867 MYH1P12882 1939 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 MAGEB6P1A0A0J9YX57 407 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 PHF20L1A8MW92 1017 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 IGHDP01880 384 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 LBX1P52954 281 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 ERO1BQ86YB8 467 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 PI4K2BQ8TCG2 481 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 CNKSR2Q8WXI2 1034 aa27.67■■■□□ 2.02
TDP1-216ENST00000556867 GLRX3O76003 335 aaKnown RBP27.66■■■□□ 2.02
TDP1-216ENST00000556867 INHBEP58166 350 aa27.66■■■□□ 2.02
TDP1-216ENST00000556867 TSKSQ9UJT2 592 aa27.66■■■□□ 2.02
TDP1-216ENST00000556867 DDX60LQ5H9U9 1706 aaKnown RBP27.65■■■□□ 2.02
TDP1-216ENST00000556867 UBE3CQ15386 1083 aa27.65■■■□□ 2.02
TDP1-216ENST00000556867 ZSCAN25Q6NSZ9 544 aa27.65■■■□□ 2.02
TDP1-216ENST00000556867 KBTBD3Q8NAB2 608 aa27.65■■■□□ 2.02
TDP1-216ENST00000556867 OTUD5Q96G74 571 aa27.65■■■□□ 2.02
TDP1-216ENST00000556867 DOCK1Q14185 1865 aa27.65■■■□□ 2.02
TDP1-216ENST00000556867 SLURP2P0DP57 97 aa27.64■■■□□ 2.02
TDP1-216ENST00000556867 USP5P45974 858 aa27.64■■■□□ 2.02
TDP1-216ENST00000556867 PI4KBQ9UBF8 816 aa27.64■■■□□ 2.02
TDP1-216ENST00000556867 NAV1Q8NEY1 1877 aa27.64■■■□□ 2.01
TDP1-216ENST00000556867 TRPA1O75762 1119 aa27.63■■■□□ 2.01
TDP1-216ENST00000556867 PPIL2Q13356 520 aa27.63■■■□□ 2.01
TDP1-216ENST00000556867 CRNKL1Q9BZJ0 848 aaKnown RBP27.63■■■□□ 2.01
TDP1-216ENST00000556867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.63■■■□□ 2.01
TDP1-216ENST00000556867 STAP2Q9UGK3 403 aa27.63■■■□□ 2.01
TDP1-216ENST00000556867 HERC5Q9UII4 1024 aaKnown RBP27.63■■■□□ 2.01
TDP1-216ENST00000556867 TESPA1A2RU30 521 aaPredicted RBP27.62■■■□□ 2.01
TDP1-216ENST00000556867 PPATQ06203 517 aa27.62■■■□□ 2.01
TDP1-216ENST00000556867 SLFNL1Q499Z3 407 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms