RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DDTLA6NHG4 134 aaPredicted RBP18.33■□□□□ 0.52
CHD8-211ENST00000556833 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 PI16Q6UXB8 463 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
CHD8-211ENST00000556833 XAGE2Q96GT9 111 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 PICK1Q9NRD5 415 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
CHD8-211ENST00000556833 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
CHD8-211ENST00000556833 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 SEMA3EO15041 775 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 PRKCZQ05513 592 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 SHISA4Q96DD7 197 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
CHD8-211ENST00000556833 COPRSQ9NQ92 184 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 GABRQQ9UN88 632 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
CHD8-211ENST00000556833 GAKO14976 1311 aa18.31■□□□□ 0.52
CHD8-211ENST00000556833 TRIM75PA6NK02 468 aa18.31■□□□□ 0.52
CHD8-211ENST00000556833 PTPRAP18433 802 aa18.31■□□□□ 0.52
CHD8-211ENST00000556833 RARSP54136 660 aaKnown RBP18.31■□□□□ 0.52
CHD8-211ENST00000556833 TBC1D9Q6ZT07 1266 aa18.31■□□□□ 0.52
CHD8-211ENST00000556833 ZGPATQ8N5A5 531 aaKnown RBP18.31■□□□□ 0.52
CHD8-211ENST00000556833 COLQQ9Y215 455 aaPredicted RBP18.31■□□□□ 0.52
CHD8-211ENST00000556833 MROH7-TTC4A0A0A0MT08 1334 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 H0YGN5 161 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 GRK4P32298 578 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 MECOMQ03112 1051 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 IDI2Q9BXS1 227 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
CHD8-211ENST00000556833 DOCK3Q8IZD9 2030 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 CXCL11O14625 94 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 ENTPD3O75355 529 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 GNRH1P01148 92 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 CCL5P13501 91 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 HOXD10P28358 340 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 FCGRTP55899 365 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
CHD8-211ENST00000556833 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
CHD8-211ENST00000556833 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
CHD8-211ENST00000556833 A0A0G2JLL6 359 aaPredicted RBP18.28■□□□□ 0.52
CHD8-211ENST00000556833 BCRP11274 1271 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 PRMT2P55345 433 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 PRRT2Q7Z6L0 340 aaPredicted RBP18.28■□□□□ 0.52
CHD8-211ENST00000556833 RNF208Q9H0X6 261 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 AFG3L2Q9Y4W6 797 aa18.28■□□□□ 0.52
CHD8-211ENST00000556833 GNAI3P08754 354 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 ELNP15502 786 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 MVPQ14764 893 aaKnown RBP18.27■□□□□ 0.52
CHD8-211ENST00000556833 SPTY2D1Q68D10 685 aaPredicted RBP18.27■□□□□ 0.52
CHD8-211ENST00000556833 SLF2Q8IX21 1173 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
CHD8-211ENST00000556833 DPF3Q92784 378 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 RAI14Q9P0K7 980 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 AKAP2Q9Y2D5 859 aa18.27■□□□□ 0.52
CHD8-211ENST00000556833 BCAR3O75815 825 aa18.26■□□□□ 0.51
CHD8-211ENST00000556833 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
CHD8-211ENST00000556833 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHD8-211ENST00000556833 RHBDL3P58872 404 aa18.26■□□□□ 0.51
CHD8-211ENST00000556833 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
CHD8-211ENST00000556833 FASTKD5Q7L8L6 764 aaKnown RBP18.26■□□□□ 0.51
CHD8-211ENST00000556833 UNC93B1Q9H1C4 597 aa18.26■□□□□ 0.51
CHD8-211ENST00000556833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHD8-211ENST00000556833 CDK5RAP2Q96SN8 1893 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
CHD8-211ENST00000556833 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 GPR75-ASB3A0A0A6YYF3 556 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 TNPO2O14787 897 aaKnown RBP18.24■□□□□ 0.51
CHD8-211ENST00000556833 ADCY3O60266 1144 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
CHD8-211ENST00000556833 TRIM27P14373 513 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 FLT3LGP49771 235 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 UBXN2AP68543 259 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
CHD8-211ENST00000556833 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
CHD8-211ENST00000556833 MCAMP43121 646 aa18.23■□□□□ 0.51
CHD8-211ENST00000556833 TEX11Q8IYF3 940 aa18.23■□□□□ 0.51
CHD8-211ENST00000556833 NSUN4Q96CB9 384 aaKnown RBP18.23■□□□□ 0.51
CHD8-211ENST00000556833 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
CHD8-211ENST00000556833 GNAI2P04899 355 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 INHAP05111 366 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 GJA8P48165 433 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 SPP2Q13103 211 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHD8-211ENST00000556833 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
CHD8-211ENST00000556833 SLAIN1Q8ND83 568 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms