RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
MARK3-211ENST00000556744 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
MARK3-211ENST00000556744 GBA2Q9HCG7 927 aaPredicted RBP11.73□□□□□ -0.53
MARK3-211ENST00000556744 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
MARK3-211ENST00000556744 MYH13Q9UKX3 1938 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
MARK3-211ENST00000556744 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 ADORA1P30542 326 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 MAP2K2P36507 400 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 ECE1P42892 770 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
MARK3-211ENST00000556744 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 CAPNS2Q96L46 248 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
MARK3-211ENST00000556744 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 F8W031 263 aaPredicted RBP11.71□□□□□ -0.53
MARK3-211ENST00000556744 FRAT2O75474 233 aaPredicted RBP11.71□□□□□ -0.53
MARK3-211ENST00000556744 CRKP46108 304 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 CHAF1AQ13111 956 aaPredicted RBP11.71□□□□□ -0.53
MARK3-211ENST00000556744 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
MARK3-211ENST00000556744 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 DEFB129Q9H1M3 183 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
MARK3-211ENST00000556744 TSKSQ9UJT2 592 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
MARK3-211ENST00000556744 PAPPA2Q9BXP8 1791 aa11.71□□□□□ -0.54
MARK3-211ENST00000556744 MAST3O60307 1309 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 FAM155AB1AL88 458 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 MYO1BO43795 1136 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 HUNKP57058 714 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 RASGRF1Q13972 1273 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
MARK3-211ENST00000556744 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
MARK3-211ENST00000556744 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 UNCXA6NJT0 531 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 LDLRAD1Q5T700 205 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 PRAMEF18Q5VWM3 479 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 TEKT1Q969V4 418 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 SCAF8Q9UPN6 1271 aaKnown RBP11.69□□□□□ -0.54
MARK3-211ENST00000556744 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
MARK3-211ENST00000556744 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 SSC5DA1L4H1 1573 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 IGSF3O75054 1194 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 PRDX5P30044 214 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 MAP2K1Q02750 393 aaPredicted RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 NOGQ13253 232 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 TNFAIP1Q13829 316 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 SKIV2LQ15477 1246 aaKnown RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 TATDN2Q93075 761 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 TDRD3Q9H7E2 651 aaKnown RBP11.68□□□□□ -0.54
MARK3-211ENST00000556744 HMG20BQ9P0W2 317 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
MARK3-211ENST00000556744 GAKO14976 1311 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 CLRN2A0PK11 232 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
MARK3-211ENST00000556744 SLC10A3P09131 477 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 DNAJB2P25686 324 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 NF2P35240 595 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
MARK3-211ENST00000556744 RASA3Q14644 834 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 SUPT20HL1Q3ZLR7 823 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
MARK3-211ENST00000556744 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
MARK3-211ENST00000556744 AOC2O75106 756 aa11.66□□□□□ -0.54
MARK3-211ENST00000556744 MCAMP43121 646 aa11.66□□□□□ -0.54
MARK3-211ENST00000556744 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms