RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 CSADQ9Y600 493 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 INPP5BP32019 993 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 AACSQ86V21 672 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 ZNF296Q8WUU4 475 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-224ENST00000556737 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 IL1RAPL2Q9NP60 686 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 PTPRFP10586 1907 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 HTTP42858 3142 aa12.66□□□□□ -0.38
SHMT2-224ENST00000556737 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-224ENST00000556737 GPR25O00155 361 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 HMMRO75330 724 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
SHMT2-224ENST00000556737 SLURP2P0DP57 97 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 INHBEP58166 350 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 GSTO1P78417 241 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 PICALMQ13492 652 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 DGKZQ13574 1117 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 NOL9Q5SY16 702 aaKnown RBP12.65□□□□□ -0.38
SHMT2-224ENST00000556737 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-224ENST00000556737 LRP2BPQ9P2M1 347 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
SHMT2-224ENST00000556737 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
SHMT2-224ENST00000556737 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
SHMT2-224ENST00000556737 PPIL2Q13356 520 aa12.64□□□□□ -0.39
SHMT2-224ENST00000556737 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
SHMT2-224ENST00000556737 KIF1BPQ96EK5 621 aa12.64□□□□□ -0.39
SHMT2-224ENST00000556737 CHMP4BQ9H444 224 aaKnown RBP12.64□□□□□ -0.39
SHMT2-224ENST00000556737 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 CCL15-CCL14A0A0B4J2E2 113 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 IRF6O14896 467 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 MAP4K4O95819 1239 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-224ENST00000556737 LDHCP07864 332 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 CCL15Q16663 113 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-224ENST00000556737 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
SHMT2-224ENST00000556737 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-224ENST00000556737 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-224ENST00000556737 ANTXR1Q9H6X2 564 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 LOC285556D6RIA3 1793 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 NAV1Q8NEY1 1877 aa12.63□□□□□ -0.39
SHMT2-224ENST00000556737 APBB1O00213 710 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 IGSF3O75054 1194 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 RAB11FIP3O75154 756 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 GTF2A2P52657 109 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
SHMT2-224ENST00000556737 PPATQ06203 517 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 CRHR2Q13324 411 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 TEX11Q8IYF3 940 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
SHMT2-224ENST00000556737 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
SHMT2-224ENST00000556737 MYH7P12883 1935 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 PPP4CP60510 307 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 MOGSQ13724 837 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 ZSCAN29Q8IWY8 852 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-224ENST00000556737 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
SHMT2-224ENST00000556737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHMT2-224ENST00000556737 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 FLT1P17948 1338 aa12.61□□□□□ -0.39
SHMT2-224ENST00000556737 MYH1P12882 1939 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 TBC1D12O60347 775 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 FKTNO75072 461 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 IDH1O75874 414 aaKnown RBP12.6□□□□□ -0.39
SHMT2-224ENST00000556737 CETPP11597 493 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 DYNLL1P63167 89 aaKnown RBP12.6□□□□□ -0.39
SHMT2-224ENST00000556737 CAP1Q01518 475 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 SNAPC2Q13487 334 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
SHMT2-224ENST00000556737 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-224ENST00000556737 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 BAG3O95817 575 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 CYP7A1P22680 504 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
SHMT2-224ENST00000556737 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
SHMT2-224ENST00000556737 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
SHMT2-224ENST00000556737 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
SHMT2-224ENST00000556737 PLCG2P16885 1265 aa12.58□□□□□ -0.4
SHMT2-224ENST00000556737 PTPRAP18433 802 aa12.58□□□□□ -0.4
SHMT2-224ENST00000556737 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-224ENST00000556737 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
SHMT2-224ENST00000556737 TGFBRAP1Q8WUH2 860 aa12.58□□□□□ -0.4
SHMT2-224ENST00000556737 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
SHMT2-224ENST00000556737 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
SHMT2-224ENST00000556737 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 CCDC85CA6NKD9 419 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 GOLIM4O00461 696 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 CTNND1O60716 968 aaKnown RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 NEFLP07196 543 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms