RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
VTI1B-206ENST00000556461 MS4A4AQ96JQ5 239 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 ZNF341Q9BYN7 854 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 CHMP4BQ9H444 224 aaKnown RBP9.92□□□□□ -0.82
VTI1B-206ENST00000556461 AATFQ9NY61 560 aaKnown RBP eCLIP9.92□□□□□ -0.82
VTI1B-206ENST00000556461 ZNF112Q9UJU3 913 aa9.92□□□□□ -0.82
VTI1B-206ENST00000556461 TESPA1A2RU30 521 aaPredicted RBP9.91□□□□□ -0.82
VTI1B-206ENST00000556461 MANSC4A6NHS7 340 aaPredicted RBP9.91□□□□□ -0.82
VTI1B-206ENST00000556461 SPDYE5A6NIY4 337 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 RAB11FIP3O75154 756 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 LDHCP07864 332 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 DYNLL1P63167 89 aaKnown RBP9.91□□□□□ -0.82
VTI1B-206ENST00000556461 DCAF15Q66K64 600 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 TEX11Q8IYF3 940 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 CLASRPQ8N2M8 674 aaKnown RBP9.91□□□□□ -0.82
VTI1B-206ENST00000556461 BRI3BPQ8WY22 251 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 OTUD5Q96G74 571 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 CSADQ9Y600 493 aa9.91□□□□□ -0.82
VTI1B-206ENST00000556461 MYO5AQ9Y4I1 1855 aaKnown RBP9.91□□□□□ -0.82
VTI1B-206ENST00000556461 FAM196BA6NMK8 535 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 IDH1O75874 414 aaKnown RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 IFIT2P09913 472 aaKnown RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 CYP7A1P22680 504 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 PPP4CP60510 307 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 ZSCAN29Q8IWY8 852 aaPredicted RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 MAGEB6Q8N7X4 407 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 ZNF296Q8WUU4 475 aaPredicted RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 HOOK2Q96ED9 719 aa9.9□□□□□ -0.82
VTI1B-206ENST00000556461 OSBPL5Q9H0X9 879 aaPredicted RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.9□□□□□ -0.82
VTI1B-206ENST00000556461 CCL15-CCL14A0A0B4J2E2 113 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 GPR25O00155 361 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 IRF6O14896 467 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
VTI1B-206ENST00000556461 CHGBP05060 677 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 RRP1BQ14684 758 aaKnown RBP9.89□□□□□ -0.83
VTI1B-206ENST00000556461 CCL15Q16663 113 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 NOL9Q5SY16 702 aaKnown RBP9.89□□□□□ -0.83
VTI1B-206ENST00000556461 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
VTI1B-206ENST00000556461 ERO1BQ86YB8 467 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 MAPKAPK5Q8IW41 473 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 FAM43AQ8N2R8 423 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 TGFBRAP1Q8WUH2 860 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 ABHD8Q96I13 439 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
VTI1B-206ENST00000556461 CFHR5Q9BXR6 569 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 LRRCC1Q9C099 1032 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 MCOLN1Q9GZU1 580 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 DCTPP1Q9H773 170 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 HTTP42858 3142 aa9.89□□□□□ -0.83
VTI1B-206ENST00000556461 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 FLT1P17948 1338 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 GOLIM4O00461 696 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 BAG3O95817 575 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 MAP4K4O95819 1239 aaPredicted RBP9.88□□□□□ -0.83
VTI1B-206ENST00000556461 GTF2A2P52657 109 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 INHBEP58166 350 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 CAP1Q01518 475 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 CRHR2Q13324 411 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 PPIL2Q13356 520 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 DGKZQ13574 1117 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
VTI1B-206ENST00000556461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
VTI1B-206ENST00000556461 TCRBV5S4A2TA0A5A2 114 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 BTBD19C9JJ37 291 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 PDE6AP16499 860 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 ATP5JP18859 108 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 PPATQ06203 517 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 MAP3K12Q12852 859 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 MOGSQ13724 837 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 SHROOM1Q2M3G4 852 aaPredicted RBP9.87□□□□□ -0.83
VTI1B-206ENST00000556461 SLC4A8Q2Y0W8 1093 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 SCYL3Q8IZE3 742 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 RIOK1Q9BRS2 568 aaKnown RBP9.87□□□□□ -0.83
VTI1B-206ENST00000556461 NOL10Q9BSC4 688 aaKnown RBP9.87□□□□□ -0.83
VTI1B-206ENST00000556461 DNAJC18Q9H819 358 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 SAP30BPQ9UHR5 308 aaKnown RBP9.87□□□□□ -0.83
VTI1B-206ENST00000556461 LAMB1P07942 1786 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 AK9Q5TCS8 1911 aa9.87□□□□□ -0.83
VTI1B-206ENST00000556461 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 ZNF532Q9HCE3 1301 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 COL2A1P02458 1487 aaPredicted RBP9.86□□□□□ -0.83
VTI1B-206ENST00000556461 TBC1D12O60347 775 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 IGSF3O75054 1194 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 PTPRAP18433 802 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 JAG1P78504 1218 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 EVX2Q03828 476 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
VTI1B-206ENST00000556461 SLC9C2Q5TAH2 1124 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 CTU1Q7Z7A3 348 aaKnown RBP9.86□□□□□ -0.83
VTI1B-206ENST00000556461 OTUD7AQ8TE49 926 aaPredicted RBP9.86□□□□□ -0.83
VTI1B-206ENST00000556461 HAUS7Q99871 368 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms