RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 TTC6Q86TZ1 520 aa5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 C19orf47Q8N9M1 422 aaKnown RBP5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 PLPPR2Q96GM1 343 aa5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 CORO1BQ9BR76 489 aa5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 CCDC86Q9H6F5 360 aaKnown RBP5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 JPH1Q9HDC5 661 aaPredicted RBP5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 STARD13Q9Y3M8 1113 aa5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 CORINQ9Y5Q5 1042 aa5.86□□□□□ -1.47
SPTLC2-204ENST00000556264 PRR36Q9H6K5 1346 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 hCG_2014768A0A024R1R8 64 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 B2RBV5 119 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 IBSPP21815 317 aaPredicted RBP5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 MAOBP27338 520 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 IGBP1P78318 339 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 HDXQ7Z353 690 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 GPR161Q8N6U8 529 aaKnown RBP5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 ZSCAN1Q8NBB4 408 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 APPBP2Q92624 585 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 TM9SF2Q99805 663 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 SNCAIPQ9Y6H5 919 aa5.85□□□□□ -1.47
SPTLC2-204ENST00000556264 FSCN2O14926 492 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 EIF4EBP3O60516 100 aaPredicted RBP5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 SQSTM1Q13501 440 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 C6orf15Q6UXA7 325 aaPredicted RBP5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 FAM178BQ8IXR5 827 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 TMEM40Q8WWA1 233 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 WNT8BQ93098 351 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 CARD10Q9BWT7 1032 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 NRSN2Q9GZP1 204 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 MBIPQ9NS73 344 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 REV1Q9UBZ9 1251 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 PFDN2Q9UHV9 154 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 LEMD3Q9Y2U8 911 aa5.84□□□□□ -1.47
SPTLC2-204ENST00000556264 IGF1RP08069 1367 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 KDM2BQ8NHM5 1336 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 MEIS3P2A8K0S8 358 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 ZNF862O60290 1169 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 DIAPH1O60610 1272 aaKnown RBP5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 DNAJC6O75061 913 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 CTSBP07858 339 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 LIG1P18858 919 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 PLCG1P19174 1290 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 AFF1P51825 1210 aaKnown RBP5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 MLECQ14165 292 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 PDE3AQ14432 1141 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 C20orf204Q6ZNR8 217 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 SPATC1Q76KD6 591 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 ZCRB1Q8TBF4 217 aaKnown RBP5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 ELMO3Q96BJ8 720 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 ATG4CQ96DT6 458 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 WDR89Q96FK6 387 aaPredicted RBP5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 KLHDC7BQ96G42 594 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 SPC25Q9HBM1 224 aa5.83□□□□□ -1.48
SPTLC2-204ENST00000556264 SLC22A31A6NKX4 558 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 ALBP02768 609 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 GYS2P54840 703 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 ANAPC15P60006 121 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 C2orf27AQ580R0 203 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 OVOS1Q6IE37 1185 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 UNC5AQ6ZN44 842 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 C8orf86Q6ZUL3 223 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 CYFIP1Q7L576 1253 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 C12orf40Q86WS4 652 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 WFDC8Q8IUA0 241 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 GOLGA6L1Q8N7Z2 621 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 THAP3Q8WTV1 239 aaPredicted RBP5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 BRINP2Q9C0B6 783 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 TMEM260Q9NX78 707 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 GMIPQ9P107 970 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 ZMYM5Q9UJ78 669 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 NOP58Q9Y2X3 529 aaKnown RBP5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 COL4A3BPQ9Y5P4 624 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 CSADQ9Y600 493 aa5.82□□□□□ -1.48
SPTLC2-204ENST00000556264 LTBP3Q9NS15 1303 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 DNAJA2O60884 412 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 LILRB5O75023 590 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 ACRP10323 421 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 EPXP11678 715 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 NME1P15531 152 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 PDE4BQ07343 736 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 SSRP1Q08945 709 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 ZYXQ15942 572 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 INTS3Q68E01 1043 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 MRM1Q6IN84 353 aaKnown RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 SLCO4C1Q6ZQN7 724 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 C16orf86Q6ZW13 317 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 KIAA0907Q7Z7F0 614 aaPredicted RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 TAB3Q8N5C8 712 aaPredicted RBP5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 USP26Q9BXU7 913 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 GDF2Q9UK05 429 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms