RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 LIMCH1Q9UPQ0 1083 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 RPAP1Q9BWH6 1393 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 UQCRFS1P1P0C7P4 283 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 HCLS1P14317 486 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 ADORA1P30542 326 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 PUM3Q15397 648 aaKnown RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 TTC39AQ5SRH9 613 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 DDX46Q7L014 1031 aaKnown RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 ZNF589Q86UQ0 364 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 SEPT12Q8IYM1 358 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 ZSCAN31Q96LW9 406 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 CCDC85AQ96PX6 553 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 UPF3BQ9BZI7 483 aaKnown RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 CYP46A1Q9Y6A2 500 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 LRP5O75197 1615 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 MYH14Q7Z406 1995 aaKnown RBP9.91□□□□□ -0.82
ATXN3-235ENST00000556082 KAT6BQ8WYB5 2073 aa9.91□□□□□ -0.82
ATXN3-235ENST00000556082 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 KCNJ4P48050 445 aa9.9□□□□□ -0.82
ATXN3-235ENST00000556082 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
ATXN3-235ENST00000556082 JAKMIP1Q96N16 626 aaKnown RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 CDC5LQ99459 802 aaKnown RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 NYXQ9GZU5 481 aa9.9□□□□□ -0.82
ATXN3-235ENST00000556082 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
ATXN3-235ENST00000556082 RTCBQ9Y3I0 505 aaKnown RBP9.9□□□□□ -0.82
ATXN3-235ENST00000556082 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
ATXN3-235ENST00000556082 CASTP20810 708 aaKnown RBP9.89□□□□□ -0.83
ATXN3-235ENST00000556082 IGHMBP2P38935 993 aaKnown RBP9.89□□□□□ -0.83
ATXN3-235ENST00000556082 AK2P54819 239 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 ANKRD1Q15327 319 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-235ENST00000556082 ADCK5Q3MIX3 580 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 BAP1Q92560 729 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 MPHOSPH8Q99549 860 aa9.89□□□□□ -0.83
ATXN3-235ENST00000556082 QTRT2Q9H974 415 aaKnown RBP9.89□□□□□ -0.83
ATXN3-235ENST00000556082 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 SLC5A1P13866 664 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 RPS6KB1P23443 525 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 FKBP4Q02790 459 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 PDE4DQ08499 809 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 UBE3CQ15386 1083 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 SLC27A3Q5K4L6 730 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 CCDC102BQ68D86 513 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 ZGPATQ8N5A5 531 aaKnown RBP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 APPBP2Q92624 585 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 BSDC1Q9NW68 430 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-235ENST00000556082 NDUFB9Q9Y6M9 179 aa9.88□□□□□ -0.83
ATXN3-235ENST00000556082 BRD1O95696 1058 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
ATXN3-235ENST00000556082 MCAMP43121 646 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 ZAP70P43403 619 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 SCARF1Q14162 830 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 TBC1D9BQ66K14 1250 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 BLOC1S2Q6QNY1 142 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 TPTE2Q6XPS3 522 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 NEK1Q96PY6 1258 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 SEC62Q99442 399 aaKnown RBP9.87□□□□□ -0.83
ATXN3-235ENST00000556082 SEC31BQ9NQW1 1179 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 CTNNA3Q9UI47 895 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 BCORQ6W2J9 1755 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 MYH3P11055 1940 aa9.87□□□□□ -0.83
ATXN3-235ENST00000556082 BTAF1O14981 1849 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 MAST3O60307 1309 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 GOLGA6L22H0YM25 854 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 TRAK2O60296 914 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 WFS1O76024 890 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 BAG4O95429 457 aaKnown RBP9.86□□□□□ -0.83
ATXN3-235ENST00000556082 HSPD1P10809 573 aaKnown RBP9.86□□□□□ -0.83
ATXN3-235ENST00000556082 ADD2P35612 726 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 KCNQ4P56696 695 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 UBE4AQ14139 1066 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 OSBP2Q969R2 916 aa9.86□□□□□ -0.83
ATXN3-235ENST00000556082 LY75O60449 1722 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 IGSF3O75054 1194 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 CYP21A2P08686 494 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 CTHP32929 405 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms