RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 USP2O75604 605 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 SURF6O75683 361 aaKnown RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 MCAMP43121 646 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 TCP10Q12799 353 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 OS9Q13438 667 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 LDLRAD1Q5T700 205 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 TEKT1Q969V4 418 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 CCDC8Q9H0W5 538 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 ELP3Q9H9T3 547 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 IL1RAPL2Q9NP60 686 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 DBNLQ9UJU6 430 aaKnown RBP7.89□□□□□ -1.15
TMEM260-209ENST00000556079 SIPA1L1O43166 1804 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 MAST2Q6P0Q8 1798 aa7.89□□□□□ -1.15
TMEM260-209ENST00000556079 GPR25O00155 361 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 FKBP1BP68106 108 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 G3BP1Q13283 466 aaKnown RBP eCLIP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 MVPQ14764 893 aaKnown RBP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 TNNI3KQ59H18 835 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 MIGA2Q7L4E1 593 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 TBC1D22AQ8WUA7 517 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 EAF2Q96CJ1 260 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 ZDHHC15Q96MV8 337 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 DDX4Q9NQI0 724 aaKnown RBP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 PIH1D3Q9NQM4 214 aaKnown RBP7.88□□□□□ -1.15
TMEM260-209ENST00000556079 FAM198AQ9UFP1 575 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 ABCF2Q9UG63 623 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 FPGT-TNNI3KV9GXZ4 949 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 LAMB1P07942 1786 aa7.88□□□□□ -1.15
TMEM260-209ENST00000556079 RFX7Q2KHR2 1363 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 MYO1BO43795 1136 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 TM4SF4P48230 202 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 PLCB2Q00722 1185 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 CAP1Q01518 475 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 MECOMQ03112 1051 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 SLFNL1Q499Z3 407 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 SPRYD7Q5W111 196 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.87□□□□□ -1.15
TMEM260-209ENST00000556079 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 ARMC9Q7Z3E5 817 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 ADGRA1Q86SQ6 560 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 CCDC84Q86UT8 332 aaPredicted RBP7.87□□□□□ -1.15
TMEM260-209ENST00000556079 WDR66Q8TBY9 1149 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 ZKSCAN4Q969J2 545 aaPredicted RBP7.87□□□□□ -1.15
TMEM260-209ENST00000556079 WNK4Q96J92 1243 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 USP40Q9NVE5 1235 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 DENND2AQ9ULE3 1009 aa7.87□□□□□ -1.15
TMEM260-209ENST00000556079 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
TMEM260-209ENST00000556079 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 SMARCA5O60264 1052 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ST18O60284 1047 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 CHGBP05060 677 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ARID4AP29374 1257 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 INPP5BP32019 993 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 NF2P35240 595 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 BTDP43251 543 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ZAP70P43403 619 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 RGS3P49796 1198 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 PICALMQ13492 652 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 VGLL4Q14135 290 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 SHROOM1Q2M3G4 852 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 SLC4A8Q2Y0W8 1093 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 GORABQ5T7V8 394 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 FBXO46Q6PJ61 603 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 SPATA5Q8NB90 893 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 EDC3Q96F86 508 aaKnown RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ANTXR1Q9H6X2 564 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ZBTB40Q9NUA8 1239 aa7.86□□□□□ -1.15
TMEM260-209ENST00000556079 GNL3LQ9NVN8 582 aaKnown RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 NOP58Q9Y2X3 529 aaKnown RBP7.86□□□□□ -1.15
TMEM260-209ENST00000556079 ATRNL1Q5VV63 1379 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 FOCADQ5VW36 1801 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 PHIPQ8WWQ0 1821 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 MROH7-TTC4A0A0A0MT08 1334 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 GAKO14976 1311 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 KIAA0100Q14667 2235 aaKnown RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 DDTLA6NHG4 134 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 FKTNO75072 461 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 WDHD1O75717 1129 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 CYP2E1P05181 493 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 RHBDL3P58872 404 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 DYNLL1P63167 89 aaKnown RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 HDLBPQ00341 1268 aaKnown RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 TTC39AQ5SRH9 613 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 AACSQ86V21 672 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 DZIP1Q86YF9 867 aaKnown RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 SH3RF3Q8TEJ3 882 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 NSUN4Q96CB9 384 aaKnown RBP7.85□□□□□ -1.15
TMEM260-209ENST00000556079 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 MS4A4AQ96JQ5 239 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 PTPN18Q99952 460 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 RAI14Q9P0K7 980 aa7.85□□□□□ -1.15
TMEM260-209ENST00000556079 HDAC5Q9UQL6 1122 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms