RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CXCL11O14625 94 aa17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 CYP2C8P10632 490 aa17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PRMT2P55345 433 aa17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PDS5AQ29RF7 1337 aaKnown RBP17.88■□□□□ 0.45
CHMP4BP1-201ENST00000556017 SIPA1L1O43166 1804 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 ATAD5Q96QE3 1844 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 A0A0G2JLL6 359 aaPredicted RBP17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 ENTPD3O75355 529 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PTPRAP18433 802 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 SLC4A8Q2Y0W8 1093 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PRRT2Q7Z6L0 340 aaPredicted RBP17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 AFG3L2Q9Y4W6 797 aa17.87■□□□□ 0.45
CHMP4BP1-201ENST00000556017 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 RHBDL3P58872 404 aa17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 MTX1Q13505 466 aa17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 KIF22Q14807 665 aa17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 COLQQ9Y215 455 aaPredicted RBP17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 CDK5RAP2Q96SN8 1893 aa17.86■□□□□ 0.45
CHMP4BP1-201ENST00000556017 A0A1B0GUL7 405 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 LOC285556D6RIA3 1793 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 TFCP2Q12800 502 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 SCYL3Q8IZE3 742 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 GABRQQ9UN88 632 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 MYO5AQ9Y4I1 1855 aaKnown RBP17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
CHMP4BP1-201ENST00000556017 MROH7-TTC4A0A0A0MT08 1334 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 H0YGN5 161 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 GRK4P32298 578 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PRKCZQ05513 592 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PI16Q6UXB8 463 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
CHMP4BP1-201ENST00000556017 MYPNQ86TC9 1320 aa17.83■□□□□ 0.44
CHMP4BP1-201ENST00000556017 GPR75-ASB3A0A0A6YYF3 556 aa17.83■□□□□ 0.44
CHMP4BP1-201ENST00000556017 BTDP43251 543 aa17.83■□□□□ 0.44
CHMP4BP1-201ENST00000556017 MECOMQ03112 1051 aa17.83■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ABCF2Q9UG63 623 aa17.83■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ALPK3Q96L96 1907 aa17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FMNL1O95466 1100 aaPredicted RBP17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 CCL5P13501 91 aa17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 RRP1BQ14684 758 aaKnown RBP17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ZGPATQ8N5A5 531 aaKnown RBP17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 HMG20BQ9P0W2 317 aa17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FAM196BA6NMK8 535 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 SRGAP3O43295 1099 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 GJB1P08034 283 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 GJA8P48165 433 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PICALMQ13492 652 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 SLC45A1Q9Y2W3 748 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PLXNB2O15031 1838 aa17.81■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FASTKD5Q7L8L6 764 aaKnown RBP17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 DZIP1Q86YF9 867 aaKnown RBP17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 RAET1EQ8TD07 263 aa17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 NSUN4Q96CB9 384 aaKnown RBP17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
CHMP4BP1-201ENST00000556017 LAMA3Q16787 3333 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 TBC1D12O60347 775 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 TRIM27P14373 513 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 HOXD10P28358 340 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 TREML2Q5T2D2 321 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 UNC93B1Q9H1C4 597 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PRO3102Q9H379 93 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 PICK1Q9NRD5 415 aa17.79■□□□□ 0.44
CHMP4BP1-201ENST00000556017 GNAI3P08754 354 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ARID4AP29374 1257 aaPredicted RBP17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 MCAMP43121 646 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FLT3LGP49771 235 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 FCGRTP55899 365 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ZSCAN29Q8IWY8 852 aaPredicted RBP17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
CHMP4BP1-201ENST00000556017 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ELNP15502 786 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 SPATA5Q8NB90 893 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 RNF208Q9H0X6 261 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 HDAC5Q9UQL6 1122 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 AKAP2Q9Y2D5 859 aa17.77■□□□□ 0.44
CHMP4BP1-201ENST00000556017 ADCY3O60266 1144 aa17.76■□□□□ 0.43
CHMP4BP1-201ENST00000556017 JAG1P78504 1218 aa17.76■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SLAIN1Q8ND83 568 aa17.76■□□□□ 0.43
CHMP4BP1-201ENST00000556017 U2AF1L4Q8WU68 220 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms