RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 ZNF396Q96N95 335 aaPredicted RBP27.55■■■□□ 2
STRN3-207ENST00000555358 TNNT1P13805 278 aa27.55■■■□□ 2
STRN3-207ENST00000555358 FAM160A1Q05DH4 1040 aa27.55■■■□□ 2
STRN3-207ENST00000555358 CCDC73Q6ZRK6 1079 aa27.55■■■□□ 2
STRN3-207ENST00000555358 ZNF274Q96GC6 653 aaPredicted RBP27.55■■■□□ 2
STRN3-207ENST00000555358 FGAP02671 866 aa27.54■■■□□ 2
STRN3-207ENST00000555358 FBXO33Q7Z6M2 555 aa27.54■■■□□ 2
STRN3-207ENST00000555358 TXNRD3Q86VQ6 643 aa27.54■■■□□ 2
STRN3-207ENST00000555358 DHX40Q8IX18 779 aaKnown RBP27.54■■■□□ 2
STRN3-207ENST00000555358 GNL3LQ9NVN8 582 aaKnown RBP27.54■■■□□ 2
STRN3-207ENST00000555358 PNPLA7Q6ZV29 1317 aa27.54■■■□□ 2
STRN3-207ENST00000555358 LRRC8AQ8IWT6 810 aa27.53■■■□□ 2
STRN3-207ENST00000555358 PRDM10Q9NQV6 1147 aa27.53■■■□□ 2
STRN3-207ENST00000555358 MYH13Q9UKX3 1938 aa27.53■■■□□ 2
STRN3-207ENST00000555358 NCBP1Q09161 790 aaKnown RBP27.52■■■□□ 2
STRN3-207ENST00000555358 ANKIB1Q9P2G1 1089 aa27.52■■■□□ 2
STRN3-207ENST00000555358 LRP2BPQ9P2M1 347 aa27.52■■■□□ 2
STRN3-207ENST00000555358 ANKRD31Q8N7Z5 1873 aa27.52■■■□□ 2
STRN3-207ENST00000555358 RGPD3A6NKT7 1758 aaPredicted RBP27.52■■■□□ 2
STRN3-207ENST00000555358 RGPD4Q7Z3J3 1758 aa27.52■■■□□ 2
STRN3-207ENST00000555358 KINO60870 393 aaKnown RBP27.52■■■□□ 2
STRN3-207ENST00000555358 SYCP1Q15431 976 aa27.52■■■□□ 2
STRN3-207ENST00000555358 NLGN1Q8N2Q7 840 aa27.52■■■□□ 2
STRN3-207ENST00000555358 ABCF2Q9UG63 623 aa27.52■■■□□ 2
STRN3-207ENST00000555358 PPFIA3O75145 1194 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 FDPSP14324 419 aaKnown RBP27.51■■□□□ 1.99
STRN3-207ENST00000555358 HAND2P61296 217 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 ARID5BQ14865 1188 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 EZH2Q15910 746 aaKnown RBP27.51■■□□□ 1.99
STRN3-207ENST00000555358 FBXL16Q8N461 479 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 FSIP1Q8NA03 581 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 A0A087WWV3 80 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 CBX1P83916 185 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 GUCY1B3Q02153 619 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 EN1Q05925 392 aaPredicted RBP27.51■■□□□ 1.99
STRN3-207ENST00000555358 CHST3Q7LGC8 479 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 ANO10Q9NW15 660 aa27.51■■□□□ 1.99
STRN3-207ENST00000555358 IRS2Q9Y4H2 1338 aa27.5■■□□□ 1.99
STRN3-207ENST00000555358 ZSCAN20P17040 1043 aaPredicted RBP27.5■■□□□ 1.99
STRN3-207ENST00000555358 EVCP57679 992 aa27.5■■□□□ 1.99
STRN3-207ENST00000555358 MSL1Q68DK7 614 aa27.5■■□□□ 1.99
STRN3-207ENST00000555358 PAXBP1Q9Y5B6 917 aa27.5■■□□□ 1.99
STRN3-207ENST00000555358 NEMFO60524 1076 aa27.49■■□□□ 1.99
STRN3-207ENST00000555358 HIBADHP31937 336 aaKnown RBP27.49■■□□□ 1.99
STRN3-207ENST00000555358 ME1P48163 572 aa27.49■■□□□ 1.99
STRN3-207ENST00000555358 TPD52L1Q16890 204 aaPredicted RBP27.49■■□□□ 1.99
STRN3-207ENST00000555358 AIDAQ96BJ3 306 aa27.49■■□□□ 1.99
STRN3-207ENST00000555358 RBM17Q96I25 401 aaKnown RBP27.49■■□□□ 1.99
STRN3-207ENST00000555358 STRBPQ96SI9 672 aaKnown RBP27.49■■□□□ 1.99
STRN3-207ENST00000555358 DENND2AQ9ULE3 1009 aa27.49■■□□□ 1.99
STRN3-207ENST00000555358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.48■■□□□ 1.99
STRN3-207ENST00000555358 FMR1NBQ8N0W7 255 aaPredicted RBP27.48■■□□□ 1.99
STRN3-207ENST00000555358 FLAD1Q8NFF5 587 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 GPR101Q96P66 508 aaPredicted RBP27.48■■□□□ 1.99
STRN3-207ENST00000555358 CTNNA3Q9UI47 895 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 NAP1L2Q9ULW6 460 aaPredicted RBP27.48■■□□□ 1.99
STRN3-207ENST00000555358 PCDHA7Q9UN72 937 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 NRXN2Q9P2S2 1712 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 BECN2A8MW95 431 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 MBD4O95243 580 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 ARMT1Q9H993 441 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 RTEL1Q9NZ71 1219 aa27.48■■□□□ 1.99
STRN3-207ENST00000555358 KLRG2A4D1S0 409 aaPredicted RBP27.47■■□□□ 1.99
STRN3-207ENST00000555358 XDHP47989 1333 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 APPP05067 770 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 MMP10P09238 476 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 GPSM2P81274 684 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 IMMTQ16891 758 aaKnown RBP27.47■■□□□ 1.99
STRN3-207ENST00000555358 ADGRA1Q86SQ6 560 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 MRPS27Q92552 414 aaKnown RBP27.47■■□□□ 1.99
STRN3-207ENST00000555358 CAMKK2Q96RR4 588 aa27.47■■□□□ 1.99
STRN3-207ENST00000555358 USP27XA6NNY8 438 aa27.46■■□□□ 1.99
STRN3-207ENST00000555358 HOXA10P31260 410 aaPredicted RBP27.46■■□□□ 1.99
STRN3-207ENST00000555358 RAI14Q9P0K7 980 aa27.46■■□□□ 1.99
STRN3-207ENST00000555358 CACNA1SQ13698 1873 aa27.46■■□□□ 1.99
STRN3-207ENST00000555358 U2AF2P26368 475 aaKnown RBP eCLIP27.45■■□□□ 1.992e-7■■■■□ 24.4
STRN3-207ENST00000555358 CCZ1BP86790 482 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 CCZ1P86791 482 aaPredicted RBP27.45■■□□□ 1.99
STRN3-207ENST00000555358 DMTNQ08495 405 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 ADALQ6DHV7 355 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 CEP57L1Q8IYX8 460 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 MIGA1Q8NAN2 632 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 ERCC4Q92889 916 aaPredicted RBP27.45■■□□□ 1.99
STRN3-207ENST00000555358 CHMP4CQ96CF2 233 aa27.45■■□□□ 1.99
STRN3-207ENST00000555358 GPHNQ9NQX3 736 aaPredicted RBP27.45■■□□□ 1.99
STRN3-207ENST00000555358 LCORLQ8N3X6 602 aa27.45■■□□□ 1.98
STRN3-207ENST00000555358 JAG2Q9Y219 1238 aa27.45■■□□□ 1.98
STRN3-207ENST00000555358 LEMD3Q9Y2U8 911 aa27.45■■□□□ 1.98
STRN3-207ENST00000555358 A0A1W2PQ27 194 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 A0A1W2PQ64 194 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 A0A1W2PQD8 194 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 UTP14CQ5TAP6 766 aaKnown RBP27.44■■□□□ 1.98
STRN3-207ENST00000555358 CEP135Q66GS9 1140 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 NYAP1Q6ZVC0 841 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 AOPEPQ8N6M6 819 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 CCDC112Q8NEF3 446 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 SKILP12757 684 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 CYP7A1P22680 504 aa27.44■■□□□ 1.98
STRN3-207ENST00000555358 NEDD4P46934 1319 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 CCDC69A6NI79 296 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms