RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PHKA1P46020 1223 aa10.95□□□□□ -0.66
TDP1-208ENST00000553989 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
TDP1-208ENST00000553989 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
TDP1-208ENST00000553989 ABCF2Q9UG63 623 aa10.95□□□□□ -0.66
TDP1-208ENST00000553989 LRRFIP2Q9Y608 721 aaKnown RBP10.95□□□□□ -0.66
TDP1-208ENST00000553989 SEMA3EO15041 775 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 OSBPP22059 807 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 IL15P40933 162 aaPredicted RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 RGS3P49796 1198 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 PICALMQ13492 652 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 NOL9Q5SY16 702 aaKnown RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 API5Q9BZZ5 524 aaKnown RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 SRRDQ9UH36 339 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 NOB1Q9ULX3 412 aaKnown RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 KCNH4Q9UQ05 1017 aa10.94□□□□□ -0.66
TDP1-208ENST00000553989 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
TDP1-208ENST00000553989 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 CYP2C8P10632 490 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 ADORA1P30542 326 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 GRK4P32298 578 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 NUBP1P53384 320 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 FCGRTP55899 365 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 UBXN2AP68543 259 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 MTFR1Q15390 333 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 SCYL3Q8IZE3 742 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 NKX2-3Q8TAU0 364 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 DPF3Q92784 378 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 ZHX2Q9Y6X8 837 aa10.93□□□□□ -0.66
TDP1-208ENST00000553989 CENPFP49454 3210 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 CXCL11O14625 94 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 ENTPD3O75355 529 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 CTGFP29279 349 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 BTDP43251 543 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 SPTY2D1Q68D10 685 aaPredicted RBP10.92□□□□□ -0.66
TDP1-208ENST00000553989 FASTKD5Q7L8L6 764 aaKnown RBP10.92□□□□□ -0.66
TDP1-208ENST00000553989 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 SMCR8Q8TEV9 937 aaPredicted RBP10.92□□□□□ -0.66
TDP1-208ENST00000553989 RNF208Q9H0X6 261 aa10.92□□□□□ -0.66
TDP1-208ENST00000553989 COLQQ9Y215 455 aaPredicted RBP10.92□□□□□ -0.66
TDP1-208ENST00000553989 DOCK2Q92608 1830 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 ADGRA2Q96PE1 1338 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 H0YGN5 161 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
TDP1-208ENST00000553989 PTPRAP18433 802 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 TIMM10P62072 90 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 PRKCZQ05513 592 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 GORABQ5T7V8 394 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
TDP1-208ENST00000553989 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 MEIS3Q99687 375 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 IDI2Q9BXS1 227 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 COPRSQ9NQ92 184 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 AKAP2Q9Y2D5 859 aa10.91□□□□□ -0.66
TDP1-208ENST00000553989 MKI67P46013 3256 aaKnown RBP10.91□□□□□ -0.66
TDP1-208ENST00000553989 GAKO14976 1311 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
TDP1-208ENST00000553989 A0A1B0GUL7 405 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
TDP1-208ENST00000553989 CCL5P13501 91 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 FXR1P51114 621 aaKnown RBP eCLIP10.9□□□□□ -0.66
TDP1-208ENST00000553989 MOGSQ13724 837 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 MVPQ14764 893 aaKnown RBP10.9□□□□□ -0.66
TDP1-208ENST00000553989 GPAT2Q6NUI2 795 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
TDP1-208ENST00000553989 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 SHISA4Q96DD7 197 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 XAGE2Q96GT9 111 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 HTATIP2Q9BUP3 242 aa10.9□□□□□ -0.66
TDP1-208ENST00000553989 MYH2Q9UKX2 1941 aa10.9□□□□□ -0.67
TDP1-208ENST00000553989 MROH7-TTC4A0A0A0MT08 1334 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 BRCA2P51587 3418 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 DDTLA6NHG4 134 aaPredicted RBP10.89□□□□□ -0.67
TDP1-208ENST00000553989 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 CTNND1O60716 968 aaKnown RBP10.89□□□□□ -0.67
TDP1-208ENST00000553989 GNAI3P08754 354 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 BCRP11274 1271 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 TFCP2Q12800 502 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.89□□□□□ -0.67
TDP1-208ENST00000553989 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
TDP1-208ENST00000553989 RAI14Q9P0K7 980 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 AFG3L2Q9Y4W6 797 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 ATRNL1Q5VV63 1379 aa10.89□□□□□ -0.67
TDP1-208ENST00000553989 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms