RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 MAP3K12Q12852 859 aa24.85■■□□□ 1.57
XRCC3-205ENST00000553807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.85■■□□□ 1.57
XRCC3-205ENST00000553807 PRDM10Q9NQV6 1147 aa24.85■■□□□ 1.57
XRCC3-205ENST00000553807 TRPA1O75762 1119 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 MAP4K4O95819 1239 aaPredicted RBP24.84■■□□□ 1.57
XRCC3-205ENST00000553807 ZBTB48P10074 688 aaPredicted RBP24.84■■□□□ 1.57
XRCC3-205ENST00000553807 GJA5P36382 358 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 SREBF2Q12772 1141 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 TTF1Q15361 905 aaPredicted RBP24.84■■□□□ 1.57
XRCC3-205ENST00000553807 SH3BP5LQ7L8J4 393 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 OPTNQ96CV9 577 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 BOLA2Q9H3K6 86 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 RNF186Q9NXI6 227 aa24.84■■□□□ 1.57
XRCC3-205ENST00000553807 DDTLA6NHG4 134 aaPredicted RBP24.83■■□□□ 1.57
XRCC3-205ENST00000553807 IGSF3O75054 1194 aa24.83■■□□□ 1.57
XRCC3-205ENST00000553807 PLCG2P16885 1265 aa24.83■■□□□ 1.57
XRCC3-205ENST00000553807 CNKSR2Q8WXI2 1034 aa24.83■■□□□ 1.57
XRCC3-205ENST00000553807 ZKSCAN4Q969J2 545 aaPredicted RBP24.83■■□□□ 1.57
XRCC3-205ENST00000553807 SAGE1Q9NXZ1 904 aa24.83■■□□□ 1.57
XRCC3-205ENST00000553807 SUPT16HQ9Y5B9 1047 aaKnown RBP24.83■■□□□ 1.57
XRCC3-205ENST00000553807 ATRNL1Q5VV63 1379 aa24.82■■□□□ 1.56
XRCC3-205ENST00000553807 ATP5JP18859 108 aa24.82■■□□□ 1.56
XRCC3-205ENST00000553807 MIGA1Q8NAN2 632 aa24.82■■□□□ 1.56
XRCC3-205ENST00000553807 EDC3Q96F86 508 aaKnown RBP24.82■■□□□ 1.56
XRCC3-205ENST00000553807 SNCAIPQ9Y6H5 919 aa24.82■■□□□ 1.56
XRCC3-205ENST00000553807 MANSC4A6NHS7 340 aaPredicted RBP24.81■■□□□ 1.56
XRCC3-205ENST00000553807 INPP5BP32019 993 aa24.81■■□□□ 1.56
XRCC3-205ENST00000553807 DYNLL1P63167 89 aaKnown RBP24.81■■□□□ 1.56
XRCC3-205ENST00000553807 OTUD5Q96G74 571 aa24.81■■□□□ 1.56
XRCC3-205ENST00000553807 OSBPL5Q9H0X9 879 aaPredicted RBP24.81■■□□□ 1.56
XRCC3-205ENST00000553807 PAG1Q9NWQ8 432 aa24.81■■□□□ 1.56
XRCC3-205ENST00000553807 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
XRCC3-205ENST00000553807 PPP4CP60510 307 aa24.8■■□□□ 1.56
XRCC3-205ENST00000553807 GPATCH3Q96I76 525 aa24.8■■□□□ 1.56
XRCC3-205ENST00000553807 PDE6AP16499 860 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 TM4SF4P48230 202 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 TSHZ3Q63HK5 1081 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 MAPKAPK5Q8IW41 473 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 EXOC6Q8TAG9 804 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 TGFBRAP1Q8WUH2 860 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 HAUS7Q99871 368 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 ECHDC1Q9NTX5 307 aa24.79■■□□□ 1.56
XRCC3-205ENST00000553807 COL2A1P02458 1487 aaPredicted RBP24.78■■□□□ 1.56
XRCC3-205ENST00000553807 LAMB1P07942 1786 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 SPDYE5A6NIY4 337 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 SLURP2P0DP57 97 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 SLC9C2Q5TAH2 1124 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 TNS4Q8IZW8 715 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 CDK5RAP2Q96SN8 1893 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 FLT1P17948 1338 aa24.78■■□□□ 1.56
XRCC3-205ENST00000553807 ZNF112Q9UJU3 913 aa24.77■■□□□ 1.56
XRCC3-205ENST00000553807 FOCADQ5VW36 1801 aa24.77■■□□□ 1.56
XRCC3-205ENST00000553807 FAM196BA6NMK8 535 aa24.76■■□□□ 1.55
XRCC3-205ENST00000553807 HDAC1Q13547 482 aaPredicted RBP24.76■■□□□ 1.55
XRCC3-205ENST00000553807 AAMPQ13685 434 aa24.76■■□□□ 1.55
XRCC3-205ENST00000553807 TMED8Q6PL24 325 aaPredicted RBP24.76■■□□□ 1.55
XRCC3-205ENST00000553807 ERO1BQ86YB8 467 aa24.76■■□□□ 1.55
XRCC3-205ENST00000553807 ZNF532Q9HCE3 1301 aa24.76■■□□□ 1.55
XRCC3-205ENST00000553807 IFNL1Q8IU54 200 aa24.75■■□□□ 1.55
XRCC3-205ENST00000553807 CERS3Q8IU89 383 aa24.75■■□□□ 1.55
XRCC3-205ENST00000553807 ZBTB47Q9UFB7 747 aaPredicted RBP24.75■■□□□ 1.55
XRCC3-205ENST00000553807 MAGEB6P1A0A0J9YX57 407 aa24.74■■□□□ 1.55
XRCC3-205ENST00000553807 IGF2BP3O00425 579 aaKnown RBP eCLIP24.74■■□□□ 1.55
XRCC3-205ENST00000553807 TBC1D8O95759 1140 aa24.74■■□□□ 1.55
XRCC3-205ENST00000553807 USP5P45974 858 aa24.74■■□□□ 1.55
XRCC3-205ENST00000553807 INHBEP58166 350 aa24.74■■□□□ 1.55
XRCC3-205ENST00000553807 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.74■■□□□ 1.55
XRCC3-205ENST00000553807 SAP30BPQ9UHR5 308 aaKnown RBP24.74■■□□□ 1.55
XRCC3-205ENST00000553807 CCL15-CCL14A0A0B4J2E2 113 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 PHF20L1A8MW92 1017 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 GTF2A2P52657 109 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 PPIL2Q13356 520 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 CCL15Q16663 113 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 SLC4A8Q2Y0W8 1093 aa24.73■■□□□ 1.55
XRCC3-205ENST00000553807 NOL9Q5SY16 702 aaKnown RBP24.73■■□□□ 1.55
XRCC3-205ENST00000553807 OTUD7AQ8TE49 926 aaPredicted RBP24.73■■□□□ 1.55
XRCC3-205ENST00000553807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.73■■□□□ 1.55
XRCC3-205ENST00000553807 IRX6P78412 446 aaPredicted RBP24.72■■□□□ 1.55
XRCC3-205ENST00000553807 ANKRD45Q5TZF3 282 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 SCYL3Q8IZE3 742 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 BRI3BPQ8WY22 251 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 GCC1Q96CN9 775 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 MS4A4AQ96JQ5 239 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 RIOK1Q9BRS2 568 aaKnown RBP24.72■■□□□ 1.55
XRCC3-205ENST00000553807 PICK1Q9NRD5 415 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 CASP8AP2Q9UKL3 1982 aa24.72■■□□□ 1.55
XRCC3-205ENST00000553807 DOCK1Q14185 1865 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 SIPA1L1O43166 1804 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 TCRBV5S4A2TA0A5A2 114 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 IRF6O14896 467 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 ALDH1A1P00352 501 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 MAP3K10Q02779 954 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 PPATQ06203 517 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 SLFNL1Q499Z3 407 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 DHX36Q9H2U1 1008 aaKnown RBP24.71■■□□□ 1.55
XRCC3-205ENST00000553807 PALD1Q9ULE6 856 aa24.71■■□□□ 1.55
XRCC3-205ENST00000553807 TBC1D12O60347 775 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 ADD2P35612 726 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 SNAPC2Q13487 334 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 OTUD7BQ6GQQ9 843 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms