RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
TMEM253-202ENST00000553744 HOOK2Q96ED9 719 aa14.4□□□□□ -0.1
TMEM253-202ENST00000553744 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.4□□□□□ -0.1
TMEM253-202ENST00000553744 ZNF532Q9HCE3 1301 aa14.4□□□□□ -0.1
TMEM253-202ENST00000553744 COL2A1P02458 1487 aaPredicted RBP14.39□□□□□ -0.11
TMEM253-202ENST00000553744 TCRBV5S4A2TA0A5A2 114 aa14.39□□□□□ -0.11
TMEM253-202ENST00000553744 USP2O75604 605 aaPredicted RBP14.39□□□□□ -0.11
TMEM253-202ENST00000553744 IREB2P48200 963 aaKnown RBP14.39□□□□□ -0.11
TMEM253-202ENST00000553744 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
TMEM253-202ENST00000553744 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
TMEM253-202ENST00000553744 LDLRAD1Q5T700 205 aa14.39□□□□□ -0.11
TMEM253-202ENST00000553744 RASAL3Q86YV0 1011 aa14.39□□□□□ -0.11
TMEM253-202ENST00000553744 MIGA1Q8NAN2 632 aa14.39□□□□□ -0.11
TMEM253-202ENST00000553744 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
TMEM253-202ENST00000553744 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 UNCXA6NJT0 531 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 FAM155AB1AL88 458 aaPredicted RBP14.38□□□□□ -0.11
TMEM253-202ENST00000553744 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
TMEM253-202ENST00000553744 SLC10A3P09131 477 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 ADD2P35612 726 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 PDE1AP54750 535 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 SH3BP5LQ7L8J4 393 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 CCDC102AQ96A19 550 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 RIOK1Q9BRS2 568 aaKnown RBP14.38□□□□□ -0.11
TMEM253-202ENST00000553744 OSBPL5Q9H0X9 879 aaPredicted RBP14.38□□□□□ -0.11
TMEM253-202ENST00000553744 OTOFQ9HC10 1997 aa14.38□□□□□ -0.11
TMEM253-202ENST00000553744 FOCADQ5VW36 1801 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 AOC2O75106 756 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 NOGQ13253 232 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
TMEM253-202ENST00000553744 CSRNP1Q96S65 589 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 FLT1P17948 1338 aa14.37□□□□□ -0.11
TMEM253-202ENST00000553744 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
TMEM253-202ENST00000553744 MAP2K2P36507 400 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.11
TMEM253-202ENST00000553744 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 ZNF341Q9BYN7 854 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 MYH7P12883 1935 aa14.36□□□□□ -0.11
TMEM253-202ENST00000553744 CHGBP05060 677 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 MIGA2Q7L4E1 593 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 CLMNQ96JQ2 1002 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
TMEM253-202ENST00000553744 USP5P45974 858 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
TMEM253-202ENST00000553744 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 VGLL4Q14135 290 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
TMEM253-202ENST00000553744 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 SLC10A4Q96EP9 437 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
TMEM253-202ENST00000553744 DHX36Q9H2U1 1008 aaKnown RBP14.34□□□□□ -0.11
TMEM253-202ENST00000553744 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 CSADQ9Y600 493 aa14.34□□□□□ -0.11
TMEM253-202ENST00000553744 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
TMEM253-202ENST00000553744 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.12
TMEM253-202ENST00000553744 MBD4O95243 580 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 ZFYP08048 801 aaPredicted RBP14.33□□□□□ -0.12
TMEM253-202ENST00000553744 MAP2K1Q02750 393 aaPredicted RBP14.33□□□□□ -0.12
TMEM253-202ENST00000553744 MAP3K10Q02779 954 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 LRRFIP1Q32MZ4 808 aaKnown RBP14.33□□□□□ -0.12
TMEM253-202ENST00000553744 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 AK9Q5TCS8 1911 aa14.33□□□□□ -0.12
TMEM253-202ENST00000553744 TBC1D12O60347 775 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 NEFLP07196 543 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 ZBTB48P10074 688 aaPredicted RBP14.32□□□□□ -0.12
TMEM253-202ENST00000553744 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
TMEM253-202ENST00000553744 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 APPBP2Q92624 585 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
TMEM253-202ENST00000553744 EVI5LQ96CN4 794 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 WNK4Q96J92 1243 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
TMEM253-202ENST00000553744 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
TMEM253-202ENST00000553744 SNCAIPQ9Y6H5 919 aa14.32□□□□□ -0.12
TMEM253-202ENST00000553744 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 PHF20L1A8MW92 1017 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 SLURP2P0DP57 97 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 PDE4AP27815 886 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 INPP5BP32019 993 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 GJA5P36382 358 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 MKRN3Q13064 507 aaKnown RBP14.31□□□□□ -0.12
TMEM253-202ENST00000553744 NOL9Q5SY16 702 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms