RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 MRGPRX2Q96LB1 330 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 CFHR5Q9BXR6 569 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 DBF4Q9UBU7 674 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-219ENST00000553488 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 SCAF8Q9UPN6 1271 aaKnown RBP9.47□□□□□ -0.89
ATXN3-219ENST00000553488 SIAH2O43255 324 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 USP17L8P0C7I0 530 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 ZBTB38Q8NAP3 1195 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-219ENST00000553488 XDHP47989 1333 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 MED23Q9ULK4 1368 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
ATXN3-219ENST00000553488 UBE2Q2LH0YL09 131 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 GPR25O00155 361 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 TM4SF4P48230 202 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 NBPF9Q3BBW0 867 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 PRAMEF18Q5VWM3 479 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 FBXO46Q6PJ61 603 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-219ENST00000553488 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-219ENST00000553488 BAP1Q92560 729 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 R3HDMLQ9H3Y0 253 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 ANKIB1Q9P2G1 1089 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
ATXN3-219ENST00000553488 USP17L3A6NCW0 530 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 USP17L4A6NCW7 530 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 WTIPA6NIX2 430 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-219ENST00000553488 AVPP01185 164 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 PCCAP05165 728 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-219ENST00000553488 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 DACT2Q5SW24 774 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 USP17L1Q7RTZ2 530 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
ATXN3-219ENST00000553488 COL1A1P02452 1464 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-219ENST00000553488 ARAP2Q8WZ64 1704 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 WNT10BO00744 389 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 PDE8AO60658 829 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 CCDC191Q8NCU4 936 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 SNIP1Q8TAD8 396 aaKnown RBP9.43□□□□□ -0.9
ATXN3-219ENST00000553488 CCDC85AQ96PX6 553 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-219ENST00000553488 MYD88Q99836 296 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 PHAXQ9H814 394 aaKnown RBP9.43□□□□□ -0.9
ATXN3-219ENST00000553488 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
ATXN3-219ENST00000553488 FKTNO75072 461 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 SASH1O94885 1247 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
ATXN3-219ENST00000553488 SMPD1P17405 629 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 CTHP32929 405 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
ATXN3-219ENST00000553488 SREBF2Q12772 1141 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 ANKRD18AQ8IVF6 992 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 CYP4X1Q8N118 509 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 TSC1Q92574 1164 aa9.42□□□□□ -0.9
ATXN3-219ENST00000553488 ZBED3Q96IU2 234 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-219ENST00000553488 LAS1LQ9Y4W2 734 aaKnown RBP9.42□□□□□ -0.9
ATXN3-219ENST00000553488 CACNA1FO60840 1977 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 RFC5P40937 340 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 CTSWP56202 376 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 RALBP1Q15311 655 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 PKDCCQ504Y2 493 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 STRIP1Q5VSL9 837 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-219ENST00000553488 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 CWC25Q9NXE8 425 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-219ENST00000553488 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
ATXN3-219ENST00000553488 COL6A3P12111 3177 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 ZSWIM8A7E2V4 1837 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 KLRK1P26718 216 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 NF2P35240 595 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
ATXN3-219ENST00000553488 MAP3K11Q16584 847 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 HABP4Q5JVS0 413 aaKnown RBP9.4□□□□□ -0.9
ATXN3-219ENST00000553488 TTLL11Q8NHH1 800 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 METTL22Q9BUU2 404 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-219ENST00000553488 GREM2Q9H772 168 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 BSDC1Q9NW68 430 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-219ENST00000553488 FZD1Q9UP38 647 aa9.4□□□□□ -0.9
ATXN3-219ENST00000553488 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
ATXN3-219ENST00000553488 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
ATXN3-219ENST00000553488 A0A0C4DFX4 3053 aa9.39□□□□□ -0.91
ATXN3-219ENST00000553488 J3QL48 77 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms