RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ERC2O15083 957 aa22.38■■□□□ 1.17
CPSF2-202ENST00000553427 IGHDP01880 384 aa22.38■■□□□ 1.17
CPSF2-202ENST00000553427 SLC9C2Q5TAH2 1124 aa22.38■■□□□ 1.17
CPSF2-202ENST00000553427 SH3BP5LQ7L8J4 393 aa22.38■■□□□ 1.17
CPSF2-202ENST00000553427 REM2Q8IYK8 340 aaPredicted RBP22.38■■□□□ 1.17
CPSF2-202ENST00000553427 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.38■■□□□ 1.17
CPSF2-202ENST00000553427 GLRX3O76003 335 aaKnown RBP22.37■■□□□ 1.17
CPSF2-202ENST00000553427 HSPA1AP0DMV8 641 aaKnown RBP22.37■■□□□ 1.17
CPSF2-202ENST00000553427 HSPA1BP0DMV9 641 aaKnown RBP22.37■■□□□ 1.17
CPSF2-202ENST00000553427 MX1P20591 662 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 MAP3K9P80192 1104 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 MAP3K10Q02779 954 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 PICALMQ13492 652 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 PI4K2BQ8TCG2 481 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 OTUD7AQ8TE49 926 aaPredicted RBP22.37■■□□□ 1.17
CPSF2-202ENST00000553427 CSRNP1Q96S65 589 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 ZNF341Q9BYN7 854 aa22.37■■□□□ 1.17
CPSF2-202ENST00000553427 OSBPL5Q9H0X9 879 aaPredicted RBP22.37■■□□□ 1.17
CPSF2-202ENST00000553427 ADD2P35612 726 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
CPSF2-202ENST00000553427 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.36■■□□□ 1.17
CPSF2-202ENST00000553427 SLC10A4Q96EP9 437 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 CLMNQ96JQ2 1002 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 RIOK1Q9BRS2 568 aaKnown RBP22.36■■□□□ 1.17
CPSF2-202ENST00000553427 STAP2Q9UGK3 403 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 ZNF112Q9UJU3 913 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 FOCADQ5VW36 1801 aa22.36■■□□□ 1.17
CPSF2-202ENST00000553427 ZNF532Q9HCE3 1301 aa22.35■■□□□ 1.17
CPSF2-202ENST00000553427 DDTLA6NHG4 134 aaPredicted RBP22.35■■□□□ 1.17
CPSF2-202ENST00000553427 ZBTB48P10074 688 aaPredicted RBP22.35■■□□□ 1.17
CPSF2-202ENST00000553427 KIF23Q02241 960 aaPredicted RBP22.35■■□□□ 1.17
CPSF2-202ENST00000553427 SPRYD7Q5W111 196 aa22.35■■□□□ 1.17
CPSF2-202ENST00000553427 TSHZ3Q63HK5 1081 aa22.35■■□□□ 1.17
CPSF2-202ENST00000553427 ZIC5Q96T25 663 aa22.35■■□□□ 1.17
CPSF2-202ENST00000553427 FLT1P17948 1338 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 CA12O43570 354 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 DYNLL1P63167 89 aaKnown RBP22.34■■□□□ 1.17
CPSF2-202ENST00000553427 NUCB1Q02818 461 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 VGLL4Q14135 290 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 UBE3CQ15386 1083 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 ZSCAN25Q6NSZ9 544 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 ZSCAN29Q8IWY8 852 aaPredicted RBP22.34■■□□□ 1.17
CPSF2-202ENST00000553427 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 MIGA1Q8NAN2 632 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 WRNIP1Q96S55 665 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 DHX36Q9H2U1 1008 aaKnown RBP22.34■■□□□ 1.17
CPSF2-202ENST00000553427 CSADQ9Y600 493 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 LAMB1P07942 1786 aa22.34■■□□□ 1.17
CPSF2-202ENST00000553427 CDK5RAP2Q96SN8 1893 aa22.33■■□□□ 1.17
CPSF2-202ENST00000553427 TBC1D12O60347 775 aa22.33■■□□□ 1.17
CPSF2-202ENST00000553427 TGFBRAP1Q8WUH2 860 aa22.33■■□□□ 1.17
CPSF2-202ENST00000553427 AIDAQ96BJ3 306 aa22.33■■□□□ 1.17
CPSF2-202ENST00000553427 WNK4Q96J92 1243 aa22.33■■□□□ 1.17
CPSF2-202ENST00000553427 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
CPSF2-202ENST00000553427 NOL9Q5SY16 702 aaKnown RBP22.32■■□□□ 1.16
CPSF2-202ENST00000553427 MIGA2Q7L4E1 593 aa22.32■■□□□ 1.16
CPSF2-202ENST00000553427 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
CPSF2-202ENST00000553427 LNPKQ9C0E8 428 aa22.32■■□□□ 1.16
CPSF2-202ENST00000553427 MYH7P12883 1935 aa22.31■■□□□ 1.16
CPSF2-202ENST00000553427 PDE1AP54750 535 aa22.31■■□□□ 1.16
CPSF2-202ENST00000553427 BEGAINQ9BUH8 593 aa22.31■■□□□ 1.16
CPSF2-202ENST00000553427 SNCAIPQ9Y6H5 919 aa22.31■■□□□ 1.16
CPSF2-202ENST00000553427 AK9Q5TCS8 1911 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 SPDYE5A6NIY4 337 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 PHF20L1A8MW92 1017 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 ZFYP08048 801 aaPredicted RBP22.3■■□□□ 1.16
CPSF2-202ENST00000553427 METTL16Q86W50 562 aaKnown RBP22.3■■□□□ 1.16
CPSF2-202ENST00000553427 MAPKAPK5Q8IW41 473 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 ELP3Q9H9T3 547 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 SAGE1Q9NXZ1 904 aa22.3■■□□□ 1.16
CPSF2-202ENST00000553427 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
CPSF2-202ENST00000553427 MANSC4A6NHS7 340 aaPredicted RBP22.29■■□□□ 1.16
CPSF2-202ENST00000553427 FOXN1O15353 648 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 GJA5P36382 358 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 TM4SF4P48230 202 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 SREBF2Q12772 1141 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 LRRFIP1Q32MZ4 808 aaKnown RBP22.29■■□□□ 1.16
CPSF2-202ENST00000553427 OPTNQ96CV9 577 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
CPSF2-202ENST00000553427 PI4KBQ9UBF8 816 aa22.29■■□□□ 1.16
CPSF2-202ENST00000553427 DDX60LQ5H9U9 1706 aaKnown RBP22.28■■□□□ 1.16
CPSF2-202ENST00000553427 INPP5BP32019 993 aa22.28■■□□□ 1.16
CPSF2-202ENST00000553427 USP5P45974 858 aa22.28■■□□□ 1.16
CPSF2-202ENST00000553427 CTCFP49711 727 aaPredicted RBP22.28■■□□□ 1.16
CPSF2-202ENST00000553427 INHBEP58166 350 aa22.28■■□□□ 1.16
CPSF2-202ENST00000553427 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
CPSF2-202ENST00000553427 ERO1BQ86YB8 467 aa22.28■■□□□ 1.16
CPSF2-202ENST00000553427 ZKSCAN4Q969J2 545 aaPredicted RBP22.28■■□□□ 1.16
CPSF2-202ENST00000553427 TICAM2Q86XR7 235 aa22.27■■□□□ 1.16
CPSF2-202ENST00000553427 LCORLQ8N3X6 602 aa22.27■■□□□ 1.16
CPSF2-202ENST00000553427 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
CPSF2-202ENST00000553427 SIPA1L1O43166 1804 aa22.27■■□□□ 1.15
CPSF2-202ENST00000553427 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
CPSF2-202ENST00000553427 MBD4O95243 580 aa22.26■■□□□ 1.15
CPSF2-202ENST00000553427 MKRN3Q13064 507 aaKnown RBP22.26■■□□□ 1.15
CPSF2-202ENST00000553427 PPIL2Q13356 520 aa22.26■■□□□ 1.15
CPSF2-202ENST00000553427 APPBP2Q92624 585 aa22.26■■□□□ 1.15
CPSF2-202ENST00000553427 TESPA1A2RU30 521 aaPredicted RBP22.25■■□□□ 1.15
CPSF2-202ENST00000553427 RNF113AO15541 343 aaKnown RBP22.25■■□□□ 1.15
CPSF2-202ENST00000553427 HLA-DOAP06340 250 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms