RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 ZSWIM8A7E2V4 1837 aa28.42■■■□□ 2.14
TROAP-216ENST00000551567 SH3BP5LQ7L8J4 393 aa28.42■■■□□ 2.14
TROAP-216ENST00000551567 RAI14Q9P0K7 980 aa28.42■■■□□ 2.14
TROAP-216ENST00000551567 ZBTB7BO15156 539 aaPredicted RBP28.41■■■□□ 2.14
TROAP-216ENST00000551567 SURF6O75683 361 aaKnown RBP28.41■■■□□ 2.14
TROAP-216ENST00000551567 UQCRFS1P1P0C7P4 283 aa28.41■■■□□ 2.14
TROAP-216ENST00000551567 TNNI3KQ59H18 835 aa28.41■■■□□ 2.14
TROAP-216ENST00000551567 NOL9Q5SY16 702 aaKnown RBP28.41■■■□□ 2.14
TROAP-216ENST00000551567 FPGT-TNNI3KV9GXZ4 949 aa28.41■■■□□ 2.14
TROAP-216ENST00000551567 GPR75-ASB3A0A0A6YYF3 556 aa28.4■■■□□ 2.14
TROAP-216ENST00000551567 DDTLA6NHG4 134 aaPredicted RBP28.4■■■□□ 2.14
TROAP-216ENST00000551567 NSUN4Q96CB9 384 aaKnown RBP28.4■■■□□ 2.14
TROAP-216ENST00000551567 DBNDD2Q9BQY9 259 aa28.4■■■□□ 2.14
TROAP-216ENST00000551567 GPR108Q9NPR9 543 aa28.4■■■□□ 2.14
TROAP-216ENST00000551567 PTPN22Q9Y2R2 807 aa28.4■■■□□ 2.14
TROAP-216ENST00000551567 DOCK1Q14185 1865 aa28.4■■■□□ 2.14
TROAP-216ENST00000551567 SLURP2P0DP57 97 aa28.39■■■□□ 2.14
TROAP-216ENST00000551567 RHBDL3P58872 404 aa28.39■■■□□ 2.14
TROAP-216ENST00000551567 GSTO1P78417 241 aa28.39■■■□□ 2.14
TROAP-216ENST00000551567 TTC39AQ5SRH9 613 aa28.39■■■□□ 2.14
TROAP-216ENST00000551567 ZCCHC17Q9NP64 241 aaKnown RBP28.39■■■□□ 2.14
TROAP-216ENST00000551567 SNRKQ9NRH2 765 aa28.39■■■□□ 2.14
TROAP-216ENST00000551567 PDE4DIPQ5VU43 2346 aa28.38■■■□□ 2.13
TROAP-216ENST00000551567 MYO5AQ9Y4I1 1855 aaKnown RBP28.38■■■□□ 2.13
TROAP-216ENST00000551567 LDHCP07864 332 aa28.38■■■□□ 2.13
TROAP-216ENST00000551567 PANK1Q8TE04 598 aa28.38■■■□□ 2.13
TROAP-216ENST00000551567 LRP2BPQ9P2M1 347 aa28.38■■■□□ 2.13
TROAP-216ENST00000551567 KCNH4Q9UQ05 1017 aa28.38■■■□□ 2.13
TROAP-216ENST00000551567 PHF20L1A8MW92 1017 aa28.37■■■□□ 2.13
TROAP-216ENST00000551567 TLR2O60603 784 aa28.37■■■□□ 2.13
TROAP-216ENST00000551567 CCDC158Q5M9N0 1113 aa28.36■■■□□ 2.13
TROAP-216ENST00000551567 SCYL3Q8IZE3 742 aa28.36■■■□□ 2.13
TROAP-216ENST00000551567 CENPFP49454 3210 aa28.36■■■□□ 2.13
TROAP-216ENST00000551567 ANKRD23Q86SG2 305 aa28.35■■■□□ 2.13
TROAP-216ENST00000551567 PICK1Q9NRD5 415 aa28.35■■■□□ 2.13
TROAP-216ENST00000551567 PHIPQ8WWQ0 1821 aa28.34■■■□□ 2.13
TROAP-216ENST00000551567 PDHXO00330 501 aa28.34■■■□□ 2.13
TROAP-216ENST00000551567 NOP58Q9Y2X3 529 aaKnown RBP28.34■■■□□ 2.13
TROAP-216ENST00000551567 PTPRFP10586 1907 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 MOGSQ13724 837 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 ARHGEF6Q15052 776 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 CEP85Q6P2H3 762 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 ARHGAP39Q9C0H5 1083 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 TLR7Q9NYK1 1049 aaKnown RBP28.33■■■□□ 2.13
TROAP-216ENST00000551567 ZHX2Q9Y6X8 837 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 CDK5RAP2Q96SN8 1893 aa28.33■■■□□ 2.13
TROAP-216ENST00000551567 RBBP6Q7Z6E9 1792 aaKnown RBP28.32■■■□□ 2.12
TROAP-216ENST00000551567 FAM196BA6NMK8 535 aa28.32■■■□□ 2.12
TROAP-216ENST00000551567 MAP3K10Q02779 954 aa28.32■■■□□ 2.12
TROAP-216ENST00000551567 TEX11Q8IYF3 940 aa28.32■■■□□ 2.12
TROAP-216ENST00000551567 DBNLQ9UJU6 430 aaKnown RBP28.32■■■□□ 2.12
TROAP-216ENST00000551567 ATAD5Q96QE3 1844 aa28.32■■■□□ 2.12
TROAP-216ENST00000551567 ECM2O94769 699 aaPredicted RBP28.31■■■□□ 2.12
TROAP-216ENST00000551567 PTPRAP18433 802 aa28.31■■■□□ 2.12
TROAP-216ENST00000551567 LACTBP83111 547 aaPredicted RBP28.31■■■□□ 2.12
TROAP-216ENST00000551567 KIF22Q14807 665 aa28.31■■■□□ 2.12
TROAP-216ENST00000551567 NOL10Q9BSC4 688 aaKnown RBP28.31■■■□□ 2.12
TROAP-216ENST00000551567 CCDC8Q9H0W5 538 aaPredicted RBP28.31■■■□□ 2.12
TROAP-216ENST00000551567 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.31■■■□□ 2.12
TROAP-216ENST00000551567 CPA4Q9UI42 421 aa28.31■■■□□ 2.12
TROAP-216ENST00000551567 PTCH2Q9Y6C5 1203 aa28.31■■■□□ 2.12
TROAP-216ENST00000551567 COL2A1P02458 1487 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 CXCL11O14625 94 aa28.3■■■□□ 2.12
TROAP-216ENST00000551567 NPM3O75607 178 aaKnown RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 MAP4K4O95819 1239 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 CYP2E1P05181 493 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 NAA16Q6N069 864 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 SH3RF3Q8TEJ3 882 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 OSBPL5Q9H0X9 879 aaPredicted RBP28.3■■■□□ 2.12
TROAP-216ENST00000551567 CTNND1O60716 968 aaKnown RBP28.29■■■□□ 2.12
TROAP-216ENST00000551567 ZAP70P43403 619 aa28.29■■■□□ 2.12
TROAP-216ENST00000551567 ARMC5Q96C12 935 aa28.29■■■□□ 2.12
TROAP-216ENST00000551567 EAF2Q96CJ1 260 aaPredicted RBP28.29■■■□□ 2.12
TROAP-216ENST00000551567 AATFQ9NY61 560 aaKnown RBP eCLIP28.29■■■□□ 2.12
TROAP-216ENST00000551567 EXOC6BQ9Y2D4 811 aa28.29■■■□□ 2.12
TROAP-216ENST00000551567 FOCADQ5VW36 1801 aa28.29■■■□□ 2.12
TROAP-216ENST00000551567 ADGRA2Q96PE1 1338 aa28.28■■■□□ 2.12
TROAP-216ENST00000551567 SIPA1L1O43166 1804 aa28.28■■■□□ 2.12
TROAP-216ENST00000551567 GPAT2Q6NUI2 795 aa28.28■■■□□ 2.12
TROAP-216ENST00000551567 C17orf99Q6UX52 265 aa28.28■■■□□ 2.12
TROAP-216ENST00000551567 CCDC84Q86UT8 332 aaPredicted RBP28.28■■■□□ 2.12
TROAP-216ENST00000551567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.28■■■□□ 2.12
TROAP-216ENST00000551567 POTEFA5A3E0 1075 aa28.27■■■□□ 2.12
TROAP-216ENST00000551567 GADL1Q6ZQY3 521 aa28.27■■■□□ 2.12
TROAP-216ENST00000551567 ADGRA1Q86SQ6 560 aa28.27■■■□□ 2.12
TROAP-216ENST00000551567 ZNF512BQ96KM6 892 aaPredicted RBP28.27■■■□□ 2.12
TROAP-216ENST00000551567 PIH1D3Q9NQM4 214 aaKnown RBP28.27■■■□□ 2.12
TROAP-216ENST00000551567 AFG3L2Q9Y4W6 797 aa28.27■■■□□ 2.12
TROAP-216ENST00000551567 A0A0G2JLL6 359 aaPredicted RBP28.26■■■□□ 2.11
TROAP-216ENST00000551567 TBC1D12O60347 775 aa28.26■■■□□ 2.11
TROAP-216ENST00000551567 SLC9C1Q4G0N8 1177 aa28.26■■■□□ 2.11
TROAP-216ENST00000551567 PRRT2Q7Z6L0 340 aaPredicted RBP28.26■■■□□ 2.11
TROAP-216ENST00000551567 PARK7Q99497 189 aaKnown RBP28.26■■■□□ 2.11
TROAP-216ENST00000551567 KIAA0100Q14667 2235 aaKnown RBP28.26■■■□□ 2.11
TROAP-216ENST00000551567 TRIM75PA6NK02 468 aa28.25■■■□□ 2.11
TROAP-216ENST00000551567 BAG3O95817 575 aa28.25■■■□□ 2.11
TROAP-216ENST00000551567 CYP2C8P10632 490 aa28.25■■■□□ 2.11
TROAP-216ENST00000551567 MS4A1P11836 297 aa28.24■■■□□ 2.11
TROAP-216ENST00000551567 FASTKD5Q7L8L6 764 aaKnown RBP28.24■■■□□ 2.11
TROAP-216ENST00000551567 PLCG2P16885 1265 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms