RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 IFIT2P09913 472 aaKnown RBP9.31□□□□□ -0.92
ERBB3-218ENST00000551176 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
ERBB3-218ENST00000551176 INPP5BP32019 993 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 NAA16Q6N069 864 aaPredicted RBP9.31□□□□□ -0.92
ERBB3-218ENST00000551176 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 PTPN18Q99952 460 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 R3HDMLQ9H3Y0 253 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 AATFQ9NY61 560 aaKnown RBP eCLIP9.31□□□□□ -0.92
ERBB3-218ENST00000551176 ZNF112Q9UJU3 913 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 MYH13Q9UKX3 1938 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
ERBB3-218ENST00000551176 TBC1D8O95759 1140 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 PPP4CP60510 307 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 DYNLL1P63167 89 aaKnown RBP9.3□□□□□ -0.92
ERBB3-218ENST00000551176 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 IFNL1Q8IU54 200 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
ERBB3-218ENST00000551176 MAGEB6Q8N7X4 407 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 OTUD5Q96G74 571 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 ZNF341Q9BYN7 854 aa9.3□□□□□ -0.92
ERBB3-218ENST00000551176 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 MANSC4A6NHS7 340 aaPredicted RBP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 GOLIM4O00461 696 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 CHGBP05060 677 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 ATP5JP18859 108 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 CYP7A1P22680 504 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 SREBF2Q12772 1141 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 TSHZ3Q63HK5 1081 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 ZSCAN29Q8IWY8 852 aaPredicted RBP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 TEX11Q8IYF3 940 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 BRI3BPQ8WY22 251 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 DNAJC2Q99543 621 aaKnown RBP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 HAUS7Q99871 368 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 OSBPL5Q9H0X9 879 aaPredicted RBP9.29□□□□□ -0.92
ERBB3-218ENST00000551176 BOLA2Q9H3K6 86 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 CSADQ9Y600 493 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 OTOFQ9HC10 1997 aa9.29□□□□□ -0.92
ERBB3-218ENST00000551176 TCRBV5S4A2TA0A5A2 114 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 IRF6O14896 467 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 PDE6AP16499 860 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 RRP1BQ14684 758 aaKnown RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 NOL9Q5SY16 702 aaKnown RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 MAPKAPK5Q8IW41 473 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 OTUD7AQ8TE49 926 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 TGFBRAP1Q8WUH2 860 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 RIOK1Q9BRS2 568 aaKnown RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 FLT1P17948 1338 aa9.28□□□□□ -0.92
ERBB3-218ENST00000551176 COL2A1P02458 1487 aaPredicted RBP9.28□□□□□ -0.92
ERBB3-218ENST00000551176 MAST2Q6P0Q8 1798 aa9.27□□□□□ -0.92
ERBB3-218ENST00000551176 IGSF3O75054 1194 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 BAG3O95817 575 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 INHBEP58166 350 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 JAG1P78504 1218 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 MAP3K12Q12852 859 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 MOGSQ13724 837 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 SLC9C2Q5TAH2 1124 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 EXOC6Q8TAG9 804 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 CFHR5Q9BXR6 569 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 DNAJC18Q9H819 358 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 PAG1Q9NWQ8 432 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 SAP30BPQ9UHR5 308 aaKnown RBP9.27□□□□□ -0.93
ERBB3-218ENST00000551176 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
ERBB3-218ENST00000551176 ZNF532Q9HCE3 1301 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 MYH2Q9UKX2 1941 aa9.27□□□□□ -0.93
ERBB3-218ENST00000551176 CCL15-CCL14A0A0B4J2E2 113 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 TBC1D12O60347 775 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 PLCG2P16885 1265 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 PTPRAP18433 802 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 GTF2A2P52657 109 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 EVX2Q03828 476 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 PPATQ06203 517 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 CRHR2Q13324 411 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 PPIL2Q13356 520 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 HDAC1Q13547 482 aaPredicted RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 TTF1Q15361 905 aaPredicted RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 CCL15Q16663 113 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 SHROOM1Q2M3G4 852 aaPredicted RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 SLC4A8Q2Y0W8 1093 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 CCDC84Q86UT8 332 aaPredicted RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 SCYL3Q8IZE3 742 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 ZNF296Q8WUU4 475 aaPredicted RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 NOL10Q9BSC4 688 aaKnown RBP9.26□□□□□ -0.93
ERBB3-218ENST00000551176 ECHDC1Q9NTX5 307 aa9.26□□□□□ -0.93
ERBB3-218ENST00000551176 PALD1Q9ULE6 856 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms