RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZFPM1Q8IX07 1006 aa28.51■■■□□ 2.15
SMARCD1-209ENST00000550477 ZHX2Q9Y6X8 837 aa28.51■■■□□ 2.15
SMARCD1-209ENST00000550477 BTDP43251 543 aa28.5■■■□□ 2.15
SMARCD1-209ENST00000550477 GSTO1P78417 241 aa28.5■■■□□ 2.15
SMARCD1-209ENST00000550477 TFCP2Q12800 502 aa28.5■■■□□ 2.15
SMARCD1-209ENST00000550477 MTX1Q13505 466 aa28.5■■■□□ 2.15
SMARCD1-209ENST00000550477 NKX2-3Q8TAU0 364 aa28.5■■■□□ 2.15
SMARCD1-209ENST00000550477 CTNND1O60716 968 aaKnown RBP28.49■■■□□ 2.15
SMARCD1-209ENST00000550477 ECM2O94769 699 aaPredicted RBP28.49■■■□□ 2.15
SMARCD1-209ENST00000550477 MAP4K4O95819 1239 aaPredicted RBP28.49■■■□□ 2.15
SMARCD1-209ENST00000550477 FCGRTP55899 365 aa28.49■■■□□ 2.15
SMARCD1-209ENST00000550477 TRIM47Q96LD4 638 aa28.49■■■□□ 2.15
SMARCD1-209ENST00000550477 PHF20L1A8MW92 1017 aa28.48■■■□□ 2.15
SMARCD1-209ENST00000550477 GNAI2P04899 355 aa28.48■■■□□ 2.15
SMARCD1-209ENST00000550477 PTPRAP18433 802 aa28.48■■■□□ 2.15
SMARCD1-209ENST00000550477 G3BP1Q13283 466 aaKnown RBP eCLIP28.48■■■□□ 2.15
SMARCD1-209ENST00000550477 PICALMQ13492 652 aa28.48■■■□□ 2.15
SMARCD1-209ENST00000550477 MROH7-TTC4A0A0A0MT08 1334 aa28.47■■■□□ 2.15
SMARCD1-209ENST00000550477 OSBPP22059 807 aa28.47■■■□□ 2.15
SMARCD1-209ENST00000550477 GRK4P32298 578 aa28.47■■■□□ 2.15
SMARCD1-209ENST00000550477 MAP3K10Q02779 954 aa28.47■■■□□ 2.15
SMARCD1-209ENST00000550477 BIN2Q9UBW5 565 aaPredicted RBP28.47■■■□□ 2.15
SMARCD1-209ENST00000550477 MYPNQ86TC9 1320 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 GPR75-ASB3A0A0A6YYF3 556 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 A0A0G2JLL6 359 aaPredicted RBP28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 UBXN2AP68543 259 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 HABP4Q5JVS0 413 aaKnown RBP28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 GADL1Q6ZQY3 521 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 PRRT2Q7Z6L0 340 aaPredicted RBP28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 SLC45A1Q9Y2W3 748 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 AFG3L2Q9Y4W6 797 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 HTTP42858 3142 aa28.46■■■□□ 2.15
SMARCD1-209ENST00000550477 MECOMQ03112 1051 aa28.45■■■□□ 2.14
SMARCD1-209ENST00000550477 MOGSQ13724 837 aa28.45■■■□□ 2.14
SMARCD1-209ENST00000550477 FRAT1Q92837 279 aaPredicted RBP28.45■■■□□ 2.14
SMARCD1-209ENST00000550477 DOCK2Q92608 1830 aa28.45■■■□□ 2.14
SMARCD1-209ENST00000550477 ADGRA2Q96PE1 1338 aa28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 DDTLA6NHG4 134 aaPredicted RBP28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 NPM3O75607 178 aaKnown RBP28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 CYP2C8P10632 490 aa28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 ATF7IPQ6VMQ6 1270 aa28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 SPATA5Q8NB90 893 aa28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 NOL10Q9BSC4 688 aaKnown RBP28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 RAI14Q9P0K7 980 aa28.44■■■□□ 2.14
SMARCD1-209ENST00000550477 TBC1D12O60347 775 aa28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 UQCRFS1P1P0C7P4 283 aa28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 GPAT2Q6NUI2 795 aa28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 SH3BP5LQ7L8J4 393 aa28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 SMCR8Q8TEV9 937 aaPredicted RBP28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.43■■■□□ 2.14
SMARCD1-209ENST00000550477 CENPFP49454 3210 aa28.42■■■□□ 2.14
SMARCD1-209ENST00000550477 ATRNL1Q5VV63 1379 aa28.42■■■□□ 2.14
SMARCD1-209ENST00000550477 BCRP11274 1271 aa28.42■■■□□ 2.14
SMARCD1-209ENST00000550477 HMG20BQ9P0W2 317 aa28.42■■■□□ 2.14
SMARCD1-209ENST00000550477 CTGFP29279 349 aa28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 SLAIN1Q8ND83 568 aa28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 DDX4Q9NQI0 724 aaKnown RBP28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 LRP2BPQ9P2M1 347 aa28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 PNMA3Q9UL41 463 aa28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 ZSWIM8A7E2V4 1837 aa28.41■■■□□ 2.14
SMARCD1-209ENST00000550477 TRIM27P14373 513 aa28.4■■■□□ 2.14
SMARCD1-209ENST00000550477 TBC1D2Q9BYX2 928 aa28.4■■■□□ 2.14
SMARCD1-209ENST00000550477 OSBPL5Q9H0X9 879 aaPredicted RBP28.4■■■□□ 2.14
SMARCD1-209ENST00000550477 RFX7Q2KHR2 1363 aa28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 TRIM75PA6NK02 468 aa28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 ARID4AP29374 1257 aaPredicted RBP28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 MTFR1Q15390 333 aa28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 NSUN4Q96CB9 384 aaKnown RBP28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 RNF208Q9H0X6 261 aa28.39■■■□□ 2.14
SMARCD1-209ENST00000550477 RHBDL3P58872 404 aa28.38■■■□□ 2.13
SMARCD1-209ENST00000550477 PRKCZQ05513 592 aa28.38■■■□□ 2.13
SMARCD1-209ENST00000550477 AGTPBP1Q9UPW5 1226 aa28.38■■■□□ 2.13
SMARCD1-209ENST00000550477 BAG3O95817 575 aa28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 GJB1P08034 283 aa28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 PABPC4Q13310 644 aaKnown RBP eCLIP28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 CCDC158Q5M9N0 1113 aa28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 DPF3Q92784 378 aa28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 CLUAP1Q96AJ1 413 aa28.37■■■□□ 2.13
SMARCD1-209ENST00000550477 TNPO2O14787 897 aaKnown RBP28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 CCL5P13501 91 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 PLCG2P16885 1265 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 CAPN2P17655 700 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 GJA8P48165 433 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 OS9Q13438 667 aaPredicted RBP28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 TBC1D9Q6ZT07 1266 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 HTATIP2Q9BUP3 242 aa28.36■■■□□ 2.13
SMARCD1-209ENST00000550477 ZKSCAN2Q63HK3 967 aa28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 TEX11Q8IYF3 940 aa28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 PROCA1Q8NCQ7 364 aaPredicted RBP28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 COA7Q96BR5 231 aa28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 AS3MTQ9HBK9 375 aa28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 DOCK1Q14185 1865 aa28.35■■■□□ 2.13
SMARCD1-209ENST00000550477 PNMA6EA0A0J9YXQ4 647 aa28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 ADCY3O60266 1144 aa28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 BCAR3O75815 825 aa28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 TTC39AQ5SRH9 613 aa28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 GPR108Q9NPR9 543 aa28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 HERC5Q9UII4 1024 aaKnown RBP28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 MKI67P46013 3256 aaKnown RBP28.34■■■□□ 2.13
SMARCD1-209ENST00000550477 MGAMO43451 1857 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms