RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	CIAPIN1	Q6FI81	312 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	GIMAP6	Q6P9H5	292 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	SPATA5	Q8NB90	893 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	NSUN7	Q8NE18	718 aa	Known RBP	13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	WASF1	Q92558	559 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	NOL10	Q9BSC4	688 aa	Known RBP	13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	PANK2	Q9BZ23	570 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	RBSN	Q9H1K0	784 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	RCOR1	Q9UKL0	485 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	ARAP2	Q8WZ64	1704 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	SALL1	Q9NSC2	1324 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	CCDC196	A0A1B0GTZ2	297 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	TRAF5	O00463	557 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	NTSR2	O95665	410 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	IARS	P41252	1262 aa	Known RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	TERF1	P54274	439 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	EIF6	P56537	245 aa	Known RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	SCRN1	Q12765	414 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	MAP3K11	Q16584	847 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	SUSD4	Q5VX71	490 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	CCDC129	Q6ZRS4	1044 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	RBM43	Q6ZSC3	357 aa	Known RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	SAPCD2	Q86UD0	394 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	SGMS1	Q86VZ5	419 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	RTKN2	Q8IZC4	609 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	JDP2	Q8WYK2	163 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	HHIPL1	Q96JK4	782 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	ANKRD2	Q9GZV1	360 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	BSDC1	Q9NW68	430 aa	Predicted RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	USP25	Q9UHP3	1055 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	NOL7	Q9UMY1	257 aa	Known RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	ANGEL1	Q9UNK9	670 aa	Known RBP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	GJA3	Q9Y6H8	435 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	UBN2	Q6ZU65	1347 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	SCN7A	Q01118	1682 aa		13.79	□□□□□ -0.2
LETMD1-223	ENST00000550442	LAMB2	P55268	1798 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442		M0R2C6	588 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	FIBP	O43427	364 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	CELF2	O95319	508 aa	Known RBP	13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	ADORA1	P30542	326 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	REST	Q13127	1097 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	DHX8	Q14562	1220 aa	Known RBP	13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	USP50	Q70EL3	339 aa	Predicted RBP	13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	CERS3	Q8IU89	383 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	LEO1	Q8WVC0	666 aa	Predicted RBP	13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	C7orf43	Q8WVR3	580 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	SETDB2	Q96T68	719 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	NUP62CL	Q9H1M0	184 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	MYH7	P12883	1935 aa		13.78	□□□□□ -0.2
LETMD1-223	ENST00000550442	GOLGA6L6	A8MZA4	724 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	CPLX1	O14810	134 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	PRC1	O43663	620 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	GADD45B	O75293	160 aa	Predicted RBP	13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	PDE6A	P16499	860 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	NOG	Q13253	232 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	CAVIN4	Q5BKX8	364 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	SYNE3	Q6ZMZ3	975 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	STOX1	Q6ZVD7	989 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	ANKRD18A	Q8IVF6	992 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	KCNG4	Q8TDN1	519 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	STRBP	Q96SI9	672 aa	Known RBP	13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	DENND2A	Q9ULE3	1009 aa		13.77	□□□□□ -0.21
LETMD1-223	ENST00000550442	NID2	Q14112	1375 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	ZNF804B	A4D1E1	1349 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442		A0A1W2PQ27	194 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442		A0A1W2PQ64	194 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442		A0A1W2PQD8	194 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	TCRBV5S4A2T	A0A5A2	114 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	PTPDC1	A2A3K4	754 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	YEATS4	O95619	227 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	NPR1	P16066	1061 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	CDC37L1	Q7L3B6	337 aa		13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	PUS7L	Q9H0K6	701 aa	Known RBP	13.76	□□□□□ -0.21
LETMD1-223	ENST00000550442	ZNF532	Q9HCE3	1301 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	STK36	Q9NRP7	1315 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	ZNF500	O60304	480 aa	Predicted RBP	13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	IDH1	O75874	414 aa	Known RBP	13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	EPS15	P42566	896 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	TPTE2	Q6XPS3	522 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	TTC6	Q86TZ1	520 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	SYNE4	Q8N205	404 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	FBXO18	Q8NFZ0	1043 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	FUCA2	Q9BTY2	467 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	RTEL1	Q9NZ71	1219 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	RBM27	Q9P2N5	1060 aa	Known RBP	13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	ANAPC4	Q9UJX5	808 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	BCOR	Q6W2J9	1755 aa		13.75	□□□□□ -0.21
LETMD1-223	ENST00000550442	AKAP11	Q9UKA4	1901 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	APOBR	Q0VD83	1088 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	STK3	Q13188	491 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	HABP4	Q5JVS0	413 aa	Known RBP	13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	FAM200A	Q8TCP9	573 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	NLRP3	Q96P20	1036 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	LARP6	Q9BRS8	491 aa	Known RBP	13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	NAPB	Q9H115	298 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	TNMD	Q9H2S6	317 aa		13.74	□□□□□ -0.21

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