RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 STOX1Q6ZVD7 989 aa19.3■□□□□ 0.68
ATXN2-219ENST00000550104 ZNF654Q8IZM8 581 aa19.3■□□□□ 0.68
ATXN2-219ENST00000550104 RPAP1Q9BWH6 1393 aaPredicted RBP19.3■□□□□ 0.68
ATXN2-219ENST00000550104 STX17P56962 302 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 SAP30BPQ9UHR5 308 aaKnown RBP19.29■□□□□ 0.68
ATXN2-219ENST00000550104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.29■□□□□ 0.68
ATXN2-219ENST00000550104 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 FAM182BQ5T319 152 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 PRDM10Q9NQV6 1147 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 USPL1Q5W0Q7 1092 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 TCP11L1Q9NUJ3 509 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 C3P01024 1663 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 CCDC70Q6NSX1 233 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.29■□□□□ 0.68
ATXN2-219ENST00000550104 GJB4Q9NTQ9 266 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 ZNF609O15014 1411 aa19.29■□□□□ 0.68
ATXN2-219ENST00000550104 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
ATXN2-219ENST00000550104 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 VPS54Q9P1Q0 977 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 KDM6AO15550 1401 aaPredicted RBP19.28■□□□□ 0.68
ATXN2-219ENST00000550104 VWA3AA6NCI4 1184 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 PFKFB1P16118 471 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 NDUFA8P51970 172 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 UBXN4Q92575 508 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 CCDC43Q96MW1 224 aaKnown RBP19.28■□□□□ 0.68
ATXN2-219ENST00000550104 MYL5Q02045 173 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 GPS2Q13227 327 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 RRAGBQ5VZM2 374 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 CAGE1Q8TC20 777 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
ATXN2-219ENST00000550104 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■□□□ 12.6
ATXN2-219ENST00000550104 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
ATXN2-219ENST00000550104 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 BTBD18B2RXH4 712 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 RIMBP2O15034 1052 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 GNAQP50148 359 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 PDCL3Q9H2J4 239 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
ATXN2-219ENST00000550104 ERFEQ4G0M1 354 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
ATXN2-219ENST00000550104 BMP2KQ9NSY1 1161 aaPredicted RBP19.27■□□□□ 0.68
ATXN2-219ENST00000550104 MED23Q9ULK4 1368 aa19.27■□□□□ 0.68
ATXN2-219ENST00000550104 CUTAO60888 179 aa19.27■□□□□ 0.67
ATXN2-219ENST00000550104 UFL1O94874 794 aa19.27■□□□□ 0.67
ATXN2-219ENST00000550104 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.67
ATXN2-219ENST00000550104 LCORLQ8N3X6 602 aa19.27■□□□□ 0.67
ATXN2-219ENST00000550104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-219ENST00000550104 KIAA1468Q9P260 1216 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 TNKSO95271 1327 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 NUP88Q99567 741 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-219ENST00000550104 RCOR1Q9UKL0 485 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 ZNF500O60304 480 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-219ENST00000550104 STAT6P42226 847 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 NAPAP54920 295 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 TSGA10IPQ3SY00 556 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 FANCBQ8NB91 859 aa19.26■□□□□ 0.67
ATXN2-219ENST00000550104 N4BP3O15049 544 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 CALML3P27482 149 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 LRMPQ12912 555 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 CLIC6Q96NY7 704 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 RTEL1Q9NZ71 1219 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 CCDC148Q8NFR7 591 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 DEF6Q9H4E7 631 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 USP21Q9UK80 565 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 PAXBP1Q9Y5B6 917 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 PIK3AP1Q6ZUJ8 805 aa19.25■□□□□ 0.67
ATXN2-219ENST00000550104 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 ZSWIM5Q9P217 1185 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 IDEP14735 1019 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 PNOCQ13519 176 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 RFX7Q2KHR2 1363 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 STRBPQ96SI9 672 aaKnown RBP19.24■□□□□ 0.67
ATXN2-219ENST00000550104 NLRP12P59046 1061 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 CBX1P83916 185 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 PLIN2Q99541 437 aa19.24■□□□□ 0.67
ATXN2-219ENST00000550104 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-219ENST00000550104 CCDC178Q5BJE1 867 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 PGBD1Q96JS3 809 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 MST1RQ04912 1400 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 TMEM266Q2M3C6 531 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 TBC1D10CQ8IV04 446 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 DYNLL1P63167 89 aaKnown RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 PYM1Q9BRP8 204 aaKnown RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 V9GYY5 206 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 PDE4CQ08493 712 aa19.23■□□□□ 0.67
ATXN2-219ENST00000550104 ZHX1Q9UKY1 873 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-219ENST00000550104 OVOS2A0A0G2JMS6 1433 aa19.22■□□□□ 0.67
ATXN2-219ENST00000550104 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
ATXN2-219ENST00000550104 ZNF76P36508 570 aa19.22■□□□□ 0.67
ATXN2-219ENST00000550104 KIF23Q02241 960 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms