RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 TRIM29Q14134 588 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 UBXN4Q92575 508 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 BMS1Q14692 1282 aaKnown RBP16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 MNS1Q8NEH6 495 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 KCNJ14Q9UNX9 436 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PHKA1P46020 1223 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 CUTAO60888 179 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PDE6AP16499 860 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 HLFQ16534 295 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 PPP2R2CQ9Y2T4 447 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 TACC3Q9Y6A5 838 aa16.25■□□□□ 0.19
RAPGEF3-218ENST00000548919 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 FAM237AA0A1B0GTK4 181 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 SEC31AO94979 1220 aaKnown RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 WDR24Q96S15 920 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 FBXO3Q9UK99 471 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 CCP110O43303 1012 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 TOB1P50616 345 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 TTLL11Q8NHH1 800 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
RAPGEF3-218ENST00000548919 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 PLA2G4AP47712 749 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 KIF6Q6ZMV9 814 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 MAN1B1Q9UKM7 699 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 SNAP23O00161 211 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 TADA3O75528 432 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 NFE2L3Q9Y4A8 694 aa16.23■□□□□ 0.19
RAPGEF3-218ENST00000548919 TUBB4AP04350 444 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 SERTAD1Q9UHV2 236 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 ABCC12Q96J65 1359 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 GNG11P61952 73 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 DESI2Q9BSY9 194 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
RAPGEF3-218ENST00000548919 ARHGAP6O43182 974 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZRANB2O95218 330 aaKnown RBP eCLIP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 POSTNQ15063 836 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TMCO3Q6UWJ1 677 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 VGLL2Q8N8G2 317 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TC2NQ8N9U0 490 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZSCAN12O43309 604 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TBX2Q13207 712 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 NR5A1Q13285 461 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 SGMS1Q86VZ5 419 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 MED15Q96RN5 788 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 SAMSN1Q9NSI8 373 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
RAPGEF3-218ENST00000548919 ARMT1Q9H993 441 aa16.21■□□□□ 0.18
RAPGEF3-218ENST00000548919 TBC1D2BQ9UPU7 963 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms