RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 ECE1P42892 770 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 HUNKP57058 714 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 FKBP1BP68106 108 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 SUPT20HL1Q3ZLR7 823 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 NAA16Q6N069 864 aaPredicted RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 APOBEC3HQ6NTF7 200 aaKnown RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 DLK2Q6UY11 383 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.59□□□□□ -0.71
SP1-203ENST00000548560 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 GAKO14976 1311 aa10.58□□□□□ -0.71
SP1-203ENST00000548560 AOX1Q06278 1338 aa10.58□□□□□ -0.71
SP1-203ENST00000548560 NAV1Q8NEY1 1877 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
SP1-203ENST00000548560 RASSF10A6NK89 507 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 BTDP43251 543 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 MAP3K12Q12852 859 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 GRM1Q13255 1194 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 RASA3Q14644 834 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 PRAMEF18Q5VWM3 479 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 ARMC9Q7Z3E5 817 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 SAPCD2Q86UD0 394 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 NSUN4Q96CB9 384 aaKnown RBP10.58□□□□□ -0.72
SP1-203ENST00000548560 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
SP1-203ENST00000548560 GOLIM4O00461 696 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
SP1-203ENST00000548560 BAG3O95817 575 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 PLCG2P16885 1265 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 ATP5JP18859 108 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 CACNB3P54284 484 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 CDC42EP5Q6NZY7 148 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
SP1-203ENST00000548560 FAM83AQ86UY5 434 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 HOOK2Q96ED9 719 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
SP1-203ENST00000548560 HHIPL1Q96JK4 782 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
SP1-203ENST00000548560 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 NDUFB9Q9Y6M9 179 aa10.57□□□□□ -0.72
SP1-203ENST00000548560 GPR75-ASB3A0A0A6YYF3 556 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 ERC2O15083 957 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 MAP4K4O95819 1239 aaPredicted RBP10.56□□□□□ -0.72
SP1-203ENST00000548560 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
SP1-203ENST00000548560 PRKG1Q13976 671 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 CERS3Q8IU89 383 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 MAGEB6Q8N7X4 407 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 CAPNS2Q96L46 248 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.56□□□□□ -0.72
SP1-203ENST00000548560 TMEM39BQ9GZU3 492 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 SLC24A3Q9HC58 644 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 ANGEL1Q9UNK9 670 aaKnown RBP10.56□□□□□ -0.72
SP1-203ENST00000548560 MYH8P13535 1937 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 TTC41PQ6P2S7 1318 aa10.56□□□□□ -0.72
SP1-203ENST00000548560 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
SP1-203ENST00000548560 CYP7A1P22680 504 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 IREB2P48200 963 aaKnown RBP10.55□□□□□ -0.72
SP1-203ENST00000548560 VEGFBP49765 207 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 ZNF157P51786 506 aaPredicted RBP10.55□□□□□ -0.72
SP1-203ENST00000548560 TCP10Q12799 353 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 PICALMQ13492 652 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 NBPF12Q5TAG4 269 aaPredicted RBP10.55□□□□□ -0.72
SP1-203ENST00000548560 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 CYP4F22Q6NT55 531 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 RGMBQ6NW40 437 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
SP1-203ENST00000548560 FAM151AQ8WW52 585 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 HAUS7Q99871 368 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 ANTXR1Q9H6X2 564 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 AATFQ9NY61 560 aaKnown RBP eCLIP10.55□□□□□ -0.72
SP1-203ENST00000548560 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
SP1-203ENST00000548560 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
SP1-203ENST00000548560 LAMB1P07942 1786 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 ENTPD3O75355 529 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 GLRX3O76003 335 aaKnown RBP10.54□□□□□ -0.72
SP1-203ENST00000548560 NEFLP07196 543 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 MX1P20591 662 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 RGS3P49796 1198 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 NFIAQ12857 509 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 DOCK1Q14185 1865 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 ZSCAN25Q6NSZ9 544 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 TEX11Q8IYF3 940 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 ZNF384Q8TF68 577 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 IDI2Q9BXS1 227 aa10.54□□□□□ -0.72
SP1-203ENST00000548560 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
SP1-203ENST00000548560 BAZ2AQ9UIF9 1905 aaKnown RBP10.53□□□□□ -0.72
SP1-203ENST00000548560 UBE2Q2LH0YL09 131 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms