RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3B-205ENST00000548116 CYP2D6P10635 497 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 SYT1P21579 422 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 RHBDL3P58872 404 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 SENP2Q9HC62 589 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 ANGEL1Q9UNK9 670 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 LY9Q9HBG7 655 aa16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMPDL3B-205ENST00000548116 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 JAK2O60674 1132 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 DACT2Q5SW24 774 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 PSMD1Q99460 953 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
SMPDL3B-205ENST00000548116 USP5P45974 858 aa16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 FKBP1AP62942 108 aaKnown RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 GBP4Q96PP9 640 aa16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 GOLGB1Q14789 3259 aaKnown RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
SMPDL3B-205ENST00000548116 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 STX6O43752 255 aa16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 C12orf60Q5U649 245 aa16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 TOMM22Q9NS69 142 aa16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 PIM2Q9P1W9 311 aa16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.15
SMPDL3B-205ENST00000548116 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 PPIP5K2O43314 1243 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 PLCG2P16885 1265 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 LIFRP42702 1097 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 PTGER2P43116 358 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 SGMS1Q86VZ5 419 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 MAPKAPK5Q8IW41 473 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 TEX11Q8IYF3 940 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 MTA3Q9BTC8 594 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 MTMR6Q9Y217 621 aa16.01■□□□□ 0.15
SMPDL3B-205ENST00000548116 COL4A5P29400 1685 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 USP17L3A6NCW0 530 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 USP17L4A6NCW7 530 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
SMPDL3B-205ENST00000548116 ORC4O43929 436 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 PRDM1O75626 825 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 SCNN1DP51172 638 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 USP17L1Q7RTZ2 530 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 ESR2Q92731 530 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 CHAMP1Q96JM3 812 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
SMPDL3B-205ENST00000548116 APOA5Q6Q788 366 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 HHIPL2Q6UWX4 724 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 RAB11FIP4Q86YS3 637 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 ZKSCAN3Q9BRR0 538 aa16■□□□□ 0.15
SMPDL3B-205ENST00000548116 PSME4Q14997 1843 aa15.99■□□□□ 0.15
SMPDL3B-205ENST00000548116 FLT1P17948 1338 aa15.99■□□□□ 0.15
SMPDL3B-205ENST00000548116 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 SEC23AQ15436 765 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 SLC4A8Q2Y0W8 1093 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 LARP1BQ659C4 914 aaKnown RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 DDX11Q96FC9 970 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 ZNF277Q9NRM2 450 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 SAP30BPQ9UHR5 308 aaKnown RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 PLCD1P51178 756 aa15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
SMPDL3B-205ENST00000548116 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms