RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 HAUS7Q99871 368 aa28.33■■■□□ 2.13
CTDSP2-203ENST00000547701 TBC1D12O60347 775 aa28.32■■■□□ 2.12
CTDSP2-203ENST00000547701 SH3BP5LQ7L8J4 393 aa28.32■■■□□ 2.12
CTDSP2-203ENST00000547701 ADGRA1Q86SQ6 560 aa28.32■■■□□ 2.12
CTDSP2-203ENST00000547701 NOL10Q9BSC4 688 aaKnown RBP28.32■■■□□ 2.12
CTDSP2-203ENST00000547701 CFHR5Q9BXR6 569 aa28.32■■■□□ 2.12
CTDSP2-203ENST00000547701 MANSC4A6NHS7 340 aaPredicted RBP28.31■■■□□ 2.12
CTDSP2-203ENST00000547701 SREBF2Q12772 1141 aa28.31■■■□□ 2.12
CTDSP2-203ENST00000547701 VGLL4Q14135 290 aa28.31■■■□□ 2.12
CTDSP2-203ENST00000547701 GCC1Q96CN9 775 aa28.31■■■□□ 2.12
CTDSP2-203ENST00000547701 TESPA1A2RU30 521 aaPredicted RBP28.3■■■□□ 2.12
CTDSP2-203ENST00000547701 IDH1O75874 414 aaKnown RBP28.3■■■□□ 2.12
CTDSP2-203ENST00000547701 NOL9Q5SY16 702 aaKnown RBP28.3■■■□□ 2.12
CTDSP2-203ENST00000547701 ECHDC1Q9NTX5 307 aa28.3■■■□□ 2.12
CTDSP2-203ENST00000547701 CSADQ9Y600 493 aa28.3■■■□□ 2.12
CTDSP2-203ENST00000547701 RNF186Q9NXI6 227 aa28.29■■■□□ 2.12
CTDSP2-203ENST00000547701 AATFQ9NY61 560 aaKnown RBP eCLIP28.29■■■□□ 2.12
CTDSP2-203ENST00000547701 DDTLA6NHG4 134 aaPredicted RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 SPDYE5A6NIY4 337 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 SMARCA5O60264 1052 aaPredicted RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 CYP7A1P22680 504 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 NOM1Q5C9Z4 860 aaKnown RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 TEX11Q8IYF3 940 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 WRNIP1Q96S55 665 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 OSBPL5Q9H0X9 879 aaPredicted RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 DHX36Q9H2U1 1008 aaKnown RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 PAG1Q9NWQ8 432 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 SUPT16HQ9Y5B9 1047 aaKnown RBP28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 NDUFB9Q9Y6M9 179 aa28.28■■■□□ 2.12
CTDSP2-203ENST00000547701 PHF20L1A8MW92 1017 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 GJA5P36382 358 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 LBX1P52954 281 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 METTL16Q86W50 562 aaKnown RBP28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 ERO1BQ86YB8 467 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 MAGEB6Q8N7X4 407 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 SH3RF3Q8TEJ3 882 aaPredicted RBP28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 SNCAIPQ9Y6H5 919 aa28.27■■■□□ 2.12
CTDSP2-203ENST00000547701 MYH7P12883 1935 aa28.26■■■□□ 2.11
CTDSP2-203ENST00000547701 MIGA2Q7L4E1 593 aa28.26■■■□□ 2.11
CTDSP2-203ENST00000547701 BOLA2Q9H3K6 86 aa28.26■■■□□ 2.11
CTDSP2-203ENST00000547701 TTC41PQ6P2S7 1318 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 GOLIM4O00461 696 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 ALDH1A1P00352 501 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 COL13A1Q5TAT6 717 aaPredicted RBP28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 OPTNQ96CV9 577 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 MS4A4AQ96JQ5 239 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 RIOK1Q9BRS2 568 aaKnown RBP28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 ELP3Q9H9T3 547 aa28.25■■■□□ 2.11
CTDSP2-203ENST00000547701 TCRBV5S4A2TA0A5A2 114 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 PDE6AP16499 860 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 PPATQ06203 517 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 PICALMQ13492 652 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 SLC9C2Q5TAH2 1124 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 GPATCH3Q96I76 525 aa28.24■■■□□ 2.11
CTDSP2-203ENST00000547701 DNAJC2Q99543 621 aaKnown RBP28.23■■■□□ 2.11
CTDSP2-203ENST00000547701 PI4KBQ9UBF8 816 aa28.23■■■□□ 2.11
CTDSP2-203ENST00000547701 HERC5Q9UII4 1024 aaKnown RBP28.23■■■□□ 2.11
CTDSP2-203ENST00000547701 SALL3Q9BXA9 1300 aa28.22■■■□□ 2.11
CTDSP2-203ENST00000547701 PPIL2Q13356 520 aa28.22■■■□□ 2.11
CTDSP2-203ENST00000547701 ZSCAN29Q8IWY8 852 aaPredicted RBP28.22■■■□□ 2.11
CTDSP2-203ENST00000547701 SMC5Q8IY18 1101 aa28.22■■■□□ 2.11
CTDSP2-203ENST00000547701 ZKSCAN4Q969J2 545 aaPredicted RBP28.22■■■□□ 2.11
CTDSP2-203ENST00000547701 FLT1P17948 1338 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 CTNND1O60716 968 aaKnown RBP28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 TRPA1O75762 1119 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 INPP5BP32019 993 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 GTF2A2P52657 109 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 UBE3CQ15386 1083 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 IFNL1Q8IU54 200 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 EXOC6Q8TAG9 804 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 TGFBRAP1Q8WUH2 860 aa28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 RWDD1Q9H446 243 aaPredicted RBP28.21■■■□□ 2.11
CTDSP2-203ENST00000547701 SIPA1L1O43166 1804 aa28.2■■■□□ 2.11
CTDSP2-203ENST00000547701 ADD2P35612 726 aa28.2■■■□□ 2.1
CTDSP2-203ENST00000547701 FOXP4Q8IVH2 680 aaPredicted RBP28.2■■■□□ 2.1
CTDSP2-203ENST00000547701 CASP8AP2Q9UKL3 1982 aa28.2■■■□□ 2.1
CTDSP2-203ENST00000547701 MYH1P12882 1939 aa28.2■■■□□ 2.1
CTDSP2-203ENST00000547701 DYNLL1P63167 89 aaKnown RBP28.19■■■□□ 2.1
CTDSP2-203ENST00000547701 EDC3Q96F86 508 aaKnown RBP28.19■■■□□ 2.1
CTDSP2-203ENST00000547701 ZCCHC17Q9NP64 241 aaKnown RBP28.19■■■□□ 2.1
CTDSP2-203ENST00000547701 KCNH4Q9UQ05 1017 aa28.19■■■□□ 2.1
CTDSP2-203ENST00000547701 ZNF532Q9HCE3 1301 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 ERC2O15083 957 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 MKRN3Q13064 507 aaKnown RBP28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 OTUD7BQ6GQQ9 843 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 ZSCAN25Q6NSZ9 544 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 SCYL3Q8IZE3 742 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 TAOK2Q9UL54 1235 aa28.18■■■□□ 2.1
CTDSP2-203ENST00000547701 DOCK1Q14185 1865 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 KBTBD3Q8NAB2 608 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 PI4K2BQ8TCG2 481 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 CNKSR2Q8WXI2 1034 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 PTPN18Q99952 460 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 STAP2Q9UGK3 403 aa28.17■■■□□ 2.1
CTDSP2-203ENST00000547701 MAGEB6P1A0A0J9YX57 407 aa28.16■■■□□ 2.1
CTDSP2-203ENST00000547701 IGF2BP3O00425 579 aaKnown RBP eCLIP28.16■■■□□ 2.1
CTDSP2-203ENST00000547701 IRF6O14896 467 aa28.16■■■□□ 2.1
CTDSP2-203ENST00000547701 GLRX3O76003 335 aaKnown RBP28.16■■■□□ 2.1
CTDSP2-203ENST00000547701 MIGA1Q8NAN2 632 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms