RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CSRNP1Q96S65 589 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 BOLA2Q9H3K6 86 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 AK9Q5TCS8 1911 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 ATP5JP18859 108 aa14.38□□□□□ -0.11
RAB5C-204ENST00000547517 LBX1P52954 281 aa14.38□□□□□ -0.11
RAB5C-204ENST00000547517 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-204ENST00000547517 MIGA1Q8NAN2 632 aa14.38□□□□□ -0.11
RAB5C-204ENST00000547517 ZNF341Q9BYN7 854 aa14.38□□□□□ -0.11
RAB5C-204ENST00000547517 CSADQ9Y600 493 aa14.38□□□□□ -0.11
RAB5C-204ENST00000547517 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-204ENST00000547517 UNCXA6NJT0 531 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 CA12O43570 354 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 IGSF3O75054 1194 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 MAP4K4O95819 1239 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-204ENST00000547517 PLCG2P16885 1265 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 SH3BP5LQ7L8J4 393 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 GPATCH3Q96I76 525 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 PAG1Q9NWQ8 432 aa14.37□□□□□ -0.11
RAB5C-204ENST00000547517 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 GJA5P36382 358 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 HDAC1Q13547 482 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 AAMPQ13685 434 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 ZKSCAN4Q969J2 545 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 OPTNQ96CV9 577 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 HAUS7Q99871 368 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 OSBPL5Q9H0X9 879 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 ECHDC1Q9NTX5 307 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
RAB5C-204ENST00000547517 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-204ENST00000547517 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
RAB5C-204ENST00000547517 PDE6AP16499 860 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 INPP5BP32019 993 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 PPP4CP60510 307 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-204ENST00000547517 TGFBRAP1Q8WUH2 860 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-204ENST00000547517 FOCADQ5VW36 1801 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 CDK5RAP2Q96SN8 1893 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 FLT1P17948 1338 aa14.35□□□□□ -0.11
RAB5C-204ENST00000547517 LAMB1P07942 1786 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 MANSC4A6NHS7 340 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-204ENST00000547517 TRPA1O75762 1119 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 OTUD7AQ8TE49 926 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-204ENST00000547517 GCC1Q96CN9 775 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 SAGE1Q9NXZ1 904 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 ZNF532Q9HCE3 1301 aa14.34□□□□□ -0.11
RAB5C-204ENST00000547517 SPDYE5A6NIY4 337 aa14.33□□□□□ -0.12
RAB5C-204ENST00000547517 FAM196BA6NMK8 535 aa14.33□□□□□ -0.12
RAB5C-204ENST00000547517 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
RAB5C-204ENST00000547517 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-204ENST00000547517 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB5C-204ENST00000547517 SAP30BPQ9UHR5 308 aaKnown RBP14.33□□□□□ -0.12
RAB5C-204ENST00000547517 ZNF112Q9UJU3 913 aa14.33□□□□□ -0.12
RAB5C-204ENST00000547517 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 USP5P45974 858 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 TM4SF4P48230 202 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 SLC4A8Q2Y0W8 1093 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 CERS3Q8IU89 383 aa14.32□□□□□ -0.12
RAB5C-204ENST00000547517 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 DOCK1Q14185 1865 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 MYH7P12883 1935 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 CHGBP05060 677 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 MX1P20591 662 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 ADD2P35612 726 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 NOL9Q5SY16 702 aaKnown RBP14.31□□□□□ -0.12
RAB5C-204ENST00000547517 ERO1BQ86YB8 467 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
RAB5C-204ENST00000547517 RWDD1Q9H446 243 aaPredicted RBP14.31□□□□□ -0.12
RAB5C-204ENST00000547517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB5C-204ENST00000547517 DDX60LQ5H9U9 1706 aaKnown RBP14.31□□□□□ -0.12
RAB5C-204ENST00000547517 TTC41PQ6P2S7 1318 aa14.31□□□□□ -0.12
RAB5C-204ENST00000547517 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 IGF2BP3O00425 579 aaKnown RBP eCLIP14.3□□□□□ -0.124e-6■□□□□ 8.1
RAB5C-204ENST00000547517 ERC2O15083 957 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 PPIL2Q13356 520 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 IFNL1Q8IU54 200 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 LCORLQ8N3X6 602 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 PI4K2BQ8TCG2 481 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
RAB5C-204ENST00000547517 PICK1Q9NRD5 415 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 PALD1Q9ULE6 856 aa14.3□□□□□ -0.12
RAB5C-204ENST00000547517 CCL15-CCL14A0A0B4J2E2 113 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms