RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 AK9Q5TCS8 1911 aa28.49■■■□□ 2.15
SMARCC2-204ENST00000547356 CYP7A1P22680 504 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 INPP5BP32019 993 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 TEX11Q8IYF3 940 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 HOOK2Q96ED9 719 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 ZNF341Q9BYN7 854 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 SNCAIPQ9Y6H5 919 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 ATRNL1Q5VV63 1379 aa28.48■■■□□ 2.15
SMARCC2-204ENST00000547356 ZBTB48P10074 688 aaPredicted RBP28.47■■■□□ 2.15
SMARCC2-204ENST00000547356 TM4SF4P48230 202 aa28.47■■■□□ 2.15
SMARCC2-204ENST00000547356 TNS4Q8IZW8 715 aa28.47■■■□□ 2.15
SMARCC2-204ENST00000547356 CSADQ9Y600 493 aa28.47■■■□□ 2.15
SMARCC2-204ENST00000547356 DYNLL1P63167 89 aaKnown RBP28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 REM2Q8IYK8 340 aaPredicted RBP28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 MAGEB6Q8N7X4 407 aa28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 NOL10Q9BSC4 688 aaKnown RBP28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 BOLA2Q9H3K6 86 aa28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 SAGE1Q9NXZ1 904 aa28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 DOCK2Q92608 1830 aa28.46■■■□□ 2.15
SMARCC2-204ENST00000547356 GOLIM4O00461 696 aa28.45■■■□□ 2.14
SMARCC2-204ENST00000547356 SREBF2Q12772 1141 aa28.45■■■□□ 2.14
SMARCC2-204ENST00000547356 MIGA1Q8NAN2 632 aa28.45■■■□□ 2.14
SMARCC2-204ENST00000547356 OTUD5Q96G74 571 aa28.45■■■□□ 2.14
SMARCC2-204ENST00000547356 MANSC4A6NHS7 340 aaPredicted RBP28.44■■■□□ 2.14
SMARCC2-204ENST00000547356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.44■■■□□ 2.14
SMARCC2-204ENST00000547356 TBC1D8O95759 1140 aa28.43■■■□□ 2.14
SMARCC2-204ENST00000547356 BAG3O95817 575 aa28.43■■■□□ 2.14
SMARCC2-204ENST00000547356 PPP4CP60510 307 aa28.43■■■□□ 2.14
SMARCC2-204ENST00000547356 OSBPL5Q9H0X9 879 aaPredicted RBP28.43■■■□□ 2.14
SMARCC2-204ENST00000547356 ZNF112Q9UJU3 913 aa28.43■■■□□ 2.14
SMARCC2-204ENST00000547356 SPDYE5A6NIY4 337 aa28.42■■■□□ 2.14
SMARCC2-204ENST00000547356 FAM196BA6NMK8 535 aa28.42■■■□□ 2.14
SMARCC2-204ENST00000547356 ATP5JP18859 108 aa28.42■■■□□ 2.14
SMARCC2-204ENST00000547356 MAP3K12Q12852 859 aa28.42■■■□□ 2.14
SMARCC2-204ENST00000547356 TGFBRAP1Q8WUH2 860 aa28.42■■■□□ 2.14
SMARCC2-204ENST00000547356 IGF2BP3O00425 579 aaKnown RBP eCLIP28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 MAP4K4O95819 1239 aaPredicted RBP28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 TSHZ3Q63HK5 1081 aa28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 MAPKAPK5Q8IW41 473 aa28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 R3HDMLQ9H3Y0 253 aa28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 SUPT16HQ9Y5B9 1047 aaKnown RBP28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 CASP8AP2Q9UKL3 1982 aa28.41■■■□□ 2.14
SMARCC2-204ENST00000547356 NPM3O75607 178 aaKnown RBP28.4■■■□□ 2.14
SMARCC2-204ENST00000547356 IFNL1Q8IU54 200 aa28.4■■■□□ 2.14
SMARCC2-204ENST00000547356 MS4A4AQ96JQ5 239 aa28.4■■■□□ 2.14
SMARCC2-204ENST00000547356 PHF20L1A8MW92 1017 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 TTF1Q15361 905 aaPredicted RBP28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 SLFNL1Q499Z3 407 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 ERO1BQ86YB8 467 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 EXOC6Q8TAG9 804 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 PTPN18Q99952 460 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 PAG1Q9NWQ8 432 aa28.39■■■□□ 2.14
SMARCC2-204ENST00000547356 LAMB1P07942 1786 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 IGSF3O75054 1194 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 PDE6AP16499 860 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 PLCG2P16885 1265 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 BRI3BPQ8WY22 251 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 HAUS7Q99871 368 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 FLT1P17948 1338 aa28.38■■■□□ 2.13
SMARCC2-204ENST00000547356 CHGBP05060 677 aa28.37■■■□□ 2.13
SMARCC2-204ENST00000547356 SLC9C2Q5TAH2 1124 aa28.37■■■□□ 2.13
SMARCC2-204ENST00000547356 CDK5RAP2Q96SN8 1893 aa28.37■■■□□ 2.13
SMARCC2-204ENST00000547356 COL2A1P02458 1487 aaPredicted RBP28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 IRF6O14896 467 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 INHBEP58166 350 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 MAP3K10Q02779 954 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 SLC4A8Q2Y0W8 1093 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 NOL9Q5SY16 702 aaKnown RBP28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 OTUD7AQ8TE49 926 aaPredicted RBP28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 ECHDC1Q9NTX5 307 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 SAP30BPQ9UHR5 308 aaKnown RBP28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 ZNF532Q9HCE3 1301 aa28.36■■■□□ 2.13
SMARCC2-204ENST00000547356 CCL15-CCL14A0A0B4J2E2 113 aa28.35■■■□□ 2.13
SMARCC2-204ENST00000547356 TESPA1A2RU30 521 aaPredicted RBP28.35■■■□□ 2.13
SMARCC2-204ENST00000547356 CCL15Q16663 113 aa28.35■■■□□ 2.13
SMARCC2-204ENST00000547356 TCRBV5S4A2TA0A5A2 114 aa28.34■■■□□ 2.13
SMARCC2-204ENST00000547356 PPIL2Q13356 520 aa28.34■■■□□ 2.13
SMARCC2-204ENST00000547356 RIOK1Q9BRS2 568 aaKnown RBP28.34■■■□□ 2.13
SMARCC2-204ENST00000547356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.34■■■□□ 2.13
SMARCC2-204ENST00000547356 PALD1Q9ULE6 856 aa28.34■■■□□ 2.13
SMARCC2-204ENST00000547356 GTF2A2P52657 109 aa28.33■■■□□ 2.13
SMARCC2-204ENST00000547356 CCDC84Q86UT8 332 aaPredicted RBP28.33■■■□□ 2.13
SMARCC2-204ENST00000547356 SIPA1L1O43166 1804 aa28.33■■■□□ 2.13
SMARCC2-204ENST00000547356 FOCADQ5VW36 1801 aa28.33■■■□□ 2.13
SMARCC2-204ENST00000547356 PPATQ06203 517 aa28.32■■■□□ 2.12
SMARCC2-204ENST00000547356 RRP1BQ14684 758 aaKnown RBP28.32■■■□□ 2.12
SMARCC2-204ENST00000547356 SCYL3Q8IZE3 742 aa28.32■■■□□ 2.12
SMARCC2-204ENST00000547356 MAGEB6P1A0A0J9YX57 407 aa28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 TBC1D12O60347 775 aa28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 USP5P45974 858 aa28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 HDAC1Q13547 482 aaPredicted RBP28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 FAM43AQ8N2R8 423 aa28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 ZNF296Q8WUU4 475 aaPredicted RBP28.31■■■□□ 2.12
SMARCC2-204ENST00000547356 GPR25O00155 361 aa28.3■■■□□ 2.12
SMARCC2-204ENST00000547356 ALDH1A1P00352 501 aa28.3■■■□□ 2.12
SMARCC2-204ENST00000547356 ADD2P35612 726 aa28.3■■■□□ 2.12
SMARCC2-204ENST00000547356 IRX6P78412 446 aaPredicted RBP28.3■■■□□ 2.12
SMARCC2-204ENST00000547356 SNAPC2Q13487 334 aa28.3■■■□□ 2.12
SMARCC2-204ENST00000547356 CAPN15O75808 1086 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms