RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	GOLGA6A	Q9NYA3	693 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	WWC3	Q9ULE0	1092 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	MYO6	Q9UM54	1294 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TMEM131L	A2VDJ0	1609 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	SH3TC1	Q8TE82	1336 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	FLT4	P35916	1363 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	PLEKHG1	Q9ULL1	1385 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120		A0A1B0GTH6	734 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	PLEKHG3	A1L390	1219 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	PSMD14	O00487	310 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	MEFV	O15553	781 aa	Predicted RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	MAP4K4	O95819	1239 aa	Predicted RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	NEFH	P12036	1026 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	EZR	P15311	586 aa	Known RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	ELF1	P32519	619 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	NR1I3	Q14994	352 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	HDGFL1	Q5TGJ6	251 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	MYSM1	Q5VVJ2	828 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	CYP26C1	Q6V0L0	522 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	AACS	Q86V21	672 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	NME9	Q86XW9	330 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	ZNF579	Q8NAF0	562 aa	Known RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	XAGE2	Q96GT9	111 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	C8orf76	Q96K31	380 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	LARP6	Q9BRS8	491 aa	Known RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	BICC1	Q9H694	974 aa	Known RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	HAUS4	Q9H6D7	363 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	FAM184B	Q9ULE4	1060 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	FAM208A	Q9UK61	1670 aa	Known RBP	11.54	□□□□□ -0.56
UBC-213	ENST00000546120	IGSF1	Q8N6C5	1336 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	COL15A1	P39059	1388 aa		11.54	□□□□□ -0.56
UBC-213	ENST00000546120	PTPRU	Q92729	1446 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	MRC1	P22897	1456 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	DDX58	O95786	925 aa	Known RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	SYF2	O95926	243 aa	Known RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	PFKFB1	P16118	471 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	PRLR	P16471	622 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	TNFRSF8	P28908	595 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	C11orf91	Q3C1V1	193 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	GLE1	Q53GS7	698 aa	Known RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	RCSD1	Q6JBY9	416 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	EMB	Q6PCB8	327 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	ARFGAP2	Q8N6H7	521 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	CCDC155	Q8N6L0	562 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	EIF1AD	Q8N9N8	165 aa	Known RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	MIEF2	Q96C03	454 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	NUDT16	Q96DE0	195 aa	Known RBP	11.53	□□□□□ -0.56
UBC-213	ENST00000546120	SH3GL2	Q99962	352 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	HSD3B7	Q9H2F3	369 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	RNF14	Q9UBS8	474 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	HPCAL4	Q9UM19	191 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	SLIT1	O75093	1534 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120	CARMIL3	Q8ND23	1372 aa		11.53	□□□□□ -0.56
UBC-213	ENST00000546120		A0A1B0GVL5	298 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	GOLGA6B	A6NDN3	693 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	JAK2	O60674	1132 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	VSNL1	P62760	191 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	KRT83	P78385	493 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	MTHFSD	Q2M296	383 aa	Known RBP	11.52	□□□□□ -0.57
UBC-213	ENST00000546120	GRIPAP1	Q4V328	841 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	ZNF569	Q5MCW4	686 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	RESP18	Q5W5W9	173 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	PDILT	Q8N807	584 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	IGSF22	Q8N9C0	903 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	CCHCR1	Q8TD31	782 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	BCAS4	Q8TDM0	211 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	WASF1	Q92558	559 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	ANKRD27	Q96NW4	1050 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	HOMER3	Q9NSC5	361 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	DBF4	Q9UBU7	674 aa	Predicted RBP	11.52	□□□□□ -0.57
UBC-213	ENST00000546120	MCM8	Q9UJA3	840 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	CEP131	Q9UPN4	1083 aa		11.52	□□□□□ -0.57
UBC-213	ENST00000546120	MED1	Q15648	1581 aa	Predicted RBP	11.52	□□□□□ -0.57
UBC-213	ENST00000546120	LRRC10B	A6NIK2	292 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	PDIA3	P30101	505 aa	Known RBP	11.51	□□□□□ -0.57
UBC-213	ENST00000546120	STK3	Q13188	491 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	PAPD7	Q5XG87	772 aa	Known RBP	11.51	□□□□□ -0.57
UBC-213	ENST00000546120	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.51	□□□□□ -0.57
UBC-213	ENST00000546120	LINS1	Q8NG48	757 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	RUFY1	Q96T51	708 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	PNKP	Q96T60	521 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.51	□□□□□ -0.57
UBC-213	ENST00000546120	NEDD4	P46934	1319 aa		11.51	□□□□□ -0.57
UBC-213	ENST00000546120	PLCD1	P51178	756 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	MAP2K1	Q02750	393 aa	Predicted RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	SART3	Q15020	963 aa	Known RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	RRS1	Q15050	365 aa	Known RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	E2F4	Q16254	413 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	TSR1	Q2NL82	804 aa	Known RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	SPATA1	Q5VX52	437 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	TOGARAM2	Q6ZUX3	1019 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.5	□□□□□ -0.57
UBC-213	ENST00000546120	FAM227B	Q96M60	508 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	TSGA10	Q9BZW7	698 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	FANCL	Q9NW38	375 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms