RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 PRRT2Q7Z6L0 340 aaPredicted RBP20.79■□□□□ 0.92
CPSF7-225ENST00000545934 SCYL3Q8IZE3 742 aa20.79■□□□□ 0.92
CPSF7-225ENST00000545934 SIL1Q9H173 461 aa20.79■□□□□ 0.92
CPSF7-225ENST00000545934 CEP126Q9P2H0 1117 aa20.79■□□□□ 0.92
CPSF7-225ENST00000545934 CDK5RAP2Q96SN8 1893 aa20.79■□□□□ 0.92
CPSF7-225ENST00000545934 TRIOBPQ9H2D6 2365 aa20.79■□□□□ 0.92
CPSF7-225ENST00000545934 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
CPSF7-225ENST00000545934 RGS3P49796 1198 aa20.78■□□□□ 0.92
CPSF7-225ENST00000545934 PRKCZQ05513 592 aa20.78■□□□□ 0.92
CPSF7-225ENST00000545934 SLC45A1Q9Y2W3 748 aa20.78■□□□□ 0.92
CPSF7-225ENST00000545934 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
CPSF7-225ENST00000545934 PDS5AQ29RF7 1337 aaKnown RBP20.78■□□□□ 0.92
CPSF7-225ENST00000545934 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
CPSF7-225ENST00000545934 PTPRAP18433 802 aa20.77■□□□□ 0.92
CPSF7-225ENST00000545934 FCGRTP55899 365 aa20.77■□□□□ 0.92
CPSF7-225ENST00000545934 FAM163AQ96GL9 167 aaPredicted RBP20.77■□□□□ 0.92
CPSF7-225ENST00000545934 COPRSQ9NQ92 184 aa20.77■□□□□ 0.92
CPSF7-225ENST00000545934 GABRQQ9UN88 632 aa20.77■□□□□ 0.92
CPSF7-225ENST00000545934 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 ADORA1P30542 326 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 CCDC102BQ68D86 513 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 FASTKD5Q7L8L6 764 aaKnown RBP20.76■□□□□ 0.91
CPSF7-225ENST00000545934 TRMT2AQ8IZ69 625 aaKnown RBP20.76■□□□□ 0.91
CPSF7-225ENST00000545934 SLAIN1Q8ND83 568 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 PRO3102Q9H379 93 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 SIPA1L1O43166 1804 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 FOCADQ5VW36 1801 aa20.76■□□□□ 0.91
CPSF7-225ENST00000545934 UBXN2AP68543 259 aa20.75■□□□□ 0.91
CPSF7-225ENST00000545934 CHRDL2Q6WN34 429 aa20.75■□□□□ 0.91
CPSF7-225ENST00000545934 ZGPATQ8N5A5 531 aaKnown RBP20.75■□□□□ 0.91
CPSF7-225ENST00000545934 RNF208Q9H0X6 261 aa20.75■□□□□ 0.91
CPSF7-225ENST00000545934 SMC4Q9NTJ3 1288 aa20.75■□□□□ 0.91
CPSF7-225ENST00000545934 RANBP2P49792 3224 aaKnown RBP20.74■□□□□ 0.91
CPSF7-225ENST00000545934 DDTLA6NHG4 134 aaPredicted RBP20.74■□□□□ 0.91
CPSF7-225ENST00000545934 RASGRF1Q13972 1273 aa20.74■□□□□ 0.91
CPSF7-225ENST00000545934 DPF3Q92784 378 aa20.74■□□□□ 0.91
CPSF7-225ENST00000545934 DDX4Q9NQI0 724 aaKnown RBP20.74■□□□□ 0.91
CPSF7-225ENST00000545934 PICK1Q9NRD5 415 aa20.74■□□□□ 0.91
CPSF7-225ENST00000545934 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
CPSF7-225ENST00000545934 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
CPSF7-225ENST00000545934 SLURP2P0DP57 97 aa20.73■□□□□ 0.91
CPSF7-225ENST00000545934 U2AF1L4Q8WU68 220 aaKnown RBP20.73■□□□□ 0.91
CPSF7-225ENST00000545934 HTATIP2Q9BUP3 242 aa20.73■□□□□ 0.91
CPSF7-225ENST00000545934 UNC93B1Q9H1C4 597 aa20.73■□□□□ 0.91
CPSF7-225ENST00000545934 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
CPSF7-225ENST00000545934 CTNND1O60716 968 aaKnown RBP20.72■□□□□ 0.91
CPSF7-225ENST00000545934 SGPL1O95470 568 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 IRF5Q13568 498 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 PXYLP1Q8TE99 480 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 ZNF384Q8TF68 577 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 COL2A1P02458 1487 aaPredicted RBP20.72■□□□□ 0.91
CPSF7-225ENST00000545934 MYO5AQ9Y4I1 1855 aaKnown RBP20.72■□□□□ 0.91
CPSF7-225ENST00000545934 MROH7-TTC4A0A0A0MT08 1334 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 MAST2Q6P0Q8 1798 aa20.72■□□□□ 0.91
CPSF7-225ENST00000545934 ADCY3O60266 1144 aa20.71■□□□□ 0.91
CPSF7-225ENST00000545934 TBC1D12O60347 775 aa20.71■□□□□ 0.91
CPSF7-225ENST00000545934 NPM3O75607 178 aaKnown RBP20.71■□□□□ 0.91
CPSF7-225ENST00000545934 FLT3LGP49771 235 aa20.71■□□□□ 0.91
CPSF7-225ENST00000545934 RHBDL3P58872 404 aa20.71■□□□□ 0.91
CPSF7-225ENST00000545934 GADL1Q6ZQY3 521 aa20.71■□□□□ 0.91
CPSF7-225ENST00000545934 DZIP1Q86YF9 867 aaKnown RBP20.71■□□□□ 0.91
CPSF7-225ENST00000545934 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 CAPN2P17655 700 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 BTDP43251 543 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 TIMM10P62072 90 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
CPSF7-225ENST00000545934 SLF2Q8IX21 1173 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.7■□□□□ 0.9
CPSF7-225ENST00000545934 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
CPSF7-225ENST00000545934 ABCF2Q9UG63 623 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 NOB1Q9ULX3 412 aaKnown RBP20.7■□□□□ 0.9
CPSF7-225ENST00000545934 AGTPBP1Q9UPW5 1226 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 HDAC5Q9UQL6 1122 aa20.7■□□□□ 0.9
CPSF7-225ENST00000545934 FARP2O94887 1054 aaPredicted RBP20.69■□□□□ 0.9
CPSF7-225ENST00000545934 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
CPSF7-225ENST00000545934 ELNP15502 786 aa20.69■□□□□ 0.9
CPSF7-225ENST00000545934 MEIS3Q99687 375 aa20.69■□□□□ 0.9
CPSF7-225ENST00000545934 PAK6Q9NQU5 681 aaPredicted RBP20.69■□□□□ 0.9
CPSF7-225ENST00000545934 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
CPSF7-225ENST00000545934 ZBTB7BO15156 539 aaPredicted RBP20.68■□□□□ 0.9
CPSF7-225ENST00000545934 INHAP05111 366 aa20.68■□□□□ 0.9
CPSF7-225ENST00000545934 MECOMQ03112 1051 aa20.68■□□□□ 0.9
CPSF7-225ENST00000545934 PICALMQ13492 652 aa20.68■□□□□ 0.9
CPSF7-225ENST00000545934 SPTY2D1Q68D10 685 aaPredicted RBP20.68■□□□□ 0.9
CPSF7-225ENST00000545934 XAGE2Q96GT9 111 aa20.68■□□□□ 0.9
CPSF7-225ENST00000545934 API5Q9BZZ5 524 aaKnown RBP20.68■□□□□ 0.9
CPSF7-225ENST00000545934 DDX60LQ5H9U9 1706 aaKnown RBP20.67■□□□□ 0.9
CPSF7-225ENST00000545934 TRIM75PA6NK02 468 aa20.67■□□□□ 0.9
CPSF7-225ENST00000545934 TNPO2O14787 897 aaKnown RBP20.67■□□□□ 0.9
CPSF7-225ENST00000545934 MTX1Q13505 466 aa20.67■□□□□ 0.9
CPSF7-225ENST00000545934 TREML2Q5T2D2 321 aa20.67■□□□□ 0.9
CPSF7-225ENST00000545934 CCDC84Q86UT8 332 aaPredicted RBP20.67■□□□□ 0.9
CPSF7-225ENST00000545934 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
CPSF7-225ENST00000545934 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
CPSF7-225ENST00000545934 NR2E3Q9Y5X4 410 aa20.67■□□□□ 0.9
CPSF7-225ENST00000545934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.67■□□□□ 0.9
CPSF7-225ENST00000545934 MAP4K4O95819 1239 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-225ENST00000545934 PROCA1Q8NCQ7 364 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms