RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CIAO1O76071 339 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 IGKV5-2P06315 115 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 TPM1P09493 284 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 CPA1P15085 419 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ZSCAN20P17040 1043 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 IL15P40933 162 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 EXOSC10Q01780 885 aaKnown RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 NR1H3Q13133 447 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 PTPN14Q15678 1187 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 TPD52L1Q16890 204 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 PUS10Q3MIT2 529 aaKnown RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ADALQ6DHV7 355 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF790Q6PG37 636 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 LUZP1Q86V48 1076 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 FCHSD1Q86WN1 690 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF397Q8NF99 534 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ANKRD24Q8TF21 1146 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 PGBD1Q96JS3 809 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 TIGD1Q96MW7 591 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF830Q96NB3 372 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 BOLA2Q9H3K6 86 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 PA2G4Q9UQ80 394 aaKnown RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 MTMR7Q9Y216 660 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 SLC27A5Q9Y2P5 690 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 KIF1AQ12756 1690 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 IKBKBO14920 756 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 CBFA2T2O43439 604 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 NR1I2O75469 434 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 HSP90B1P14625 803 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 TUBB4BP68371 445 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PRR20EP86478 221 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PRR20CP86479 221 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PRR20DP86480 221 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PRR20BP86481 221 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PRR20AP86496 221 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 FGD1P98174 961 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 NCBP1Q09161 790 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PKDCCQ504Y2 493 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 ZMYM1Q5SVZ6 1142 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 Q6ZUG5 572 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 CCAR1Q8IX12 1150 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 JMYQ8N9B5 988 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 NSUN7Q8NE18 718 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 ENGASEQ8NFI3 743 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PLBD2Q8NHP8 589 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 MRPS27Q92552 414 aaKnown RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 DCAF5Q96JK2 942 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 FMNL2Q96PY5 1086 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 CCDC8Q9H0W5 538 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
SNHG1-225ENST00000545920 MORC2Q9Y6X9 1032 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-225ENST00000545920 PTPDC1A2A3K4 754 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 GOLGA6L9A6NEM1 432 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 ATP8B1O43520 1251 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 KCNQ3O43525 872 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 CDKL5O76039 1030 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 TATP17735 454 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 CT47A1Q5JQC4 288 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF589Q86UQ0 364 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 FERMT3Q86UX7 667 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 IFNL2Q8IZJ0 200 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 DBNLQ9UJU6 430 aaKnown RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 DDX41Q9UJV9 622 aaKnown RBP7.5□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF609O15014 1411 aa7.5□□□□□ -1.21
SNHG1-225ENST00000545920 PXDNQ92626 1479 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 RGPD8O14715 1765 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 ZNF142P52746 1687 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 FAM237AA0A1B0GTK4 181 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 RNF113AO15541 343 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 SLU7O95391 586 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 CYP21A2P08686 494 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 SKILP12757 684 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 CASP7P55210 303 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 SCRN1Q12765 414 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 CAMK4Q16566 473 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 PROSER3Q2NL68 480 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 SPRYD7Q5W111 196 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-225ENST00000545920 TTC5Q8N0Z6 440 aa7.49□□□□□ -1.21
SNHG1-225ENST00000545920 CCAR2Q8N163 923 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms