RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 SLURP2P0DP57 97 aa33.98■■■■□ 3.03
PDCD2-211ENST00000544336 MOGSQ13724 837 aa33.98■■■■□ 3.03
PDCD2-211ENST00000544336 SLC4A8Q2Y0W8 1093 aa33.98■■■■□ 3.03
PDCD2-211ENST00000544336 DDX4Q9NQI0 724 aaKnown RBP33.98■■■■□ 3.03
PDCD2-211ENST00000544336 MKI67P46013 3256 aaKnown RBP33.98■■■■□ 3.03
PDCD2-211ENST00000544336 MROH7-TTC4A0A0A0MT08 1334 aa33.98■■■■□ 3.03
PDCD2-211ENST00000544336 PHF20L1A8MW92 1017 aa33.97■■■■□ 3.03
PDCD2-211ENST00000544336 GORABQ5T7V8 394 aa33.97■■■■□ 3.03
PDCD2-211ENST00000544336 ATF7IPQ6VMQ6 1270 aa33.97■■■■□ 3.03
PDCD2-211ENST00000544336 ERICH6Q7L0X2 663 aa33.97■■■■□ 3.03
PDCD2-211ENST00000544336 BRCA2P51587 3418 aa33.97■■■■□ 3.03
PDCD2-211ENST00000544336 DDTLA6NHG4 134 aaPredicted RBP33.96■■■■□ 3.03
PDCD2-211ENST00000544336 GNAI2P04899 355 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 CTGFP29279 349 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 MECOMQ03112 1051 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 PI16Q6UXB8 463 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 SCYL3Q8IZE3 742 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 PICK1Q9NRD5 415 aa33.96■■■■□ 3.03
PDCD2-211ENST00000544336 PSMC4P43686 418 aa33.95■■■■□ 3.03
PDCD2-211ENST00000544336 FAM163AQ96GL9 167 aaPredicted RBP33.95■■■■□ 3.03
PDCD2-211ENST00000544336 HMG20BQ9P0W2 317 aa33.95■■■■□ 3.03
PDCD2-211ENST00000544336 ZHX2Q9Y6X8 837 aa33.95■■■■□ 3.03
PDCD2-211ENST00000544336 ADGRA2Q96PE1 1338 aa33.95■■■■□ 3.03
PDCD2-211ENST00000544336 PNMA6EA0A0J9YXQ4 647 aa33.94■■■■□ 3.02
PDCD2-211ENST00000544336 GNRH1P01148 92 aa33.94■■■■□ 3.02
PDCD2-211ENST00000544336 DOCK1Q14185 1865 aa33.94■■■■□ 3.02
PDCD2-211ENST00000544336 CXCL11O14625 94 aa33.93■■■■□ 3.02
PDCD2-211ENST00000544336 GPAT2Q6NUI2 795 aa33.93■■■■□ 3.02
PDCD2-211ENST00000544336 TBC1D9Q6ZT07 1266 aa33.93■■■■□ 3.02
PDCD2-211ENST00000544336 TRIM47Q96LD4 638 aa33.93■■■■□ 3.02
PDCD2-211ENST00000544336 CYP2C8P10632 490 aa33.92■■■■□ 3.02
PDCD2-211ENST00000544336 PTPRAP18433 802 aa33.92■■■■□ 3.02
PDCD2-211ENST00000544336 G3BP1Q13283 466 aaKnown RBP eCLIP33.92■■■■□ 3.02
PDCD2-211ENST00000544336 SPATA5Q8NB90 893 aa33.92■■■■□ 3.02
PDCD2-211ENST00000544336 ZNF384Q8TF68 577 aa33.92■■■■□ 3.02
PDCD2-211ENST00000544336 PARK7Q99497 189 aaKnown RBP33.92■■■■□ 3.02
PDCD2-211ENST00000544336 FMNL1O95466 1100 aaPredicted RBP33.91■■■■□ 3.02
PDCD2-211ENST00000544336 PRMT2P55345 433 aa33.91■■■■□ 3.02
PDCD2-211ENST00000544336 GADL1Q6ZQY3 521 aa33.91■■■■□ 3.02
PDCD2-211ENST00000544336 GPR75-ASB3A0A0A6YYF3 556 aa33.9■■■■□ 3.02
PDCD2-211ENST00000544336 RHBDL3P58872 404 aa33.9■■■■□ 3.02
PDCD2-211ENST00000544336 RAI14Q9P0K7 980 aa33.9■■■■□ 3.02
PDCD2-211ENST00000544336 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.9■■■■□ 3.02
PDCD2-211ENST00000544336 SRRDQ9UH36 339 aa33.9■■■■□ 3.02
PDCD2-211ENST00000544336 PTPRFP10586 1907 aa33.89■■■■□ 3.02
PDCD2-211ENST00000544336 PHIPQ8WWQ0 1821 aa33.89■■■■□ 3.02
PDCD2-211ENST00000544336 OSBPP22059 807 aa33.89■■■■□ 3.02
PDCD2-211ENST00000544336 A0A0G2JLL6 359 aaPredicted RBP33.88■■■■□ 3.01
PDCD2-211ENST00000544336 MAP3K10Q02779 954 aa33.88■■■■□ 3.01
PDCD2-211ENST00000544336 PRRT2Q7Z6L0 340 aaPredicted RBP33.88■■■■□ 3.01
PDCD2-211ENST00000544336 TMEM57Q8N5G2 664 aa33.88■■■■□ 3.01
PDCD2-211ENST00000544336 AFG3L2Q9Y4W6 797 aa33.88■■■■□ 3.01
PDCD2-211ENST00000544336 MGAMO43451 1857 aa33.88■■■■□ 3.01
PDCD2-211ENST00000544336 FAM196BA6NMK8 535 aa33.87■■■■□ 3.01
PDCD2-211ENST00000544336 HOXD10P28358 340 aa33.87■■■■□ 3.01
PDCD2-211ENST00000544336 ARID4AP29374 1257 aaPredicted RBP33.87■■■■□ 3.01
PDCD2-211ENST00000544336 GSTO1P78417 241 aa33.87■■■■□ 3.01
PDCD2-211ENST00000544336 FASTKD5Q7L8L6 764 aaKnown RBP33.87■■■■□ 3.01
PDCD2-211ENST00000544336 CCDC84Q86UT8 332 aaPredicted RBP33.87■■■■□ 3.01
PDCD2-211ENST00000544336 RAET1EQ8TD07 263 aa33.87■■■■□ 3.01
PDCD2-211ENST00000544336 NSUN4Q96CB9 384 aaKnown RBP33.87■■■■□ 3.01
PDCD2-211ENST00000544336 MYPNQ86TC9 1320 aa33.86■■■■□ 3.01
PDCD2-211ENST00000544336 CTNND1O60716 968 aaKnown RBP33.86■■■■□ 3.01
PDCD2-211ENST00000544336 LDHCP07864 332 aa33.86■■■■□ 3.01
PDCD2-211ENST00000544336 GCC1Q96CN9 775 aa33.86■■■■□ 3.01
PDCD2-211ENST00000544336 TRIM75PA6NK02 468 aa33.85■■■■□ 3.01
PDCD2-211ENST00000544336 BCRP11274 1271 aa33.85■■■■□ 3.01
PDCD2-211ENST00000544336 MCAMP43121 646 aa33.85■■■■□ 3.01
PDCD2-211ENST00000544336 MTFR1Q15390 333 aa33.84■■■■□ 3.01
PDCD2-211ENST00000544336 ZKSCAN2Q63HK3 967 aa33.84■■■■□ 3.01
PDCD2-211ENST00000544336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.83■■■■□ 3.01
PDCD2-211ENST00000544336 LRP2BPQ9P2M1 347 aa33.83■■■■□ 3.01
PDCD2-211ENST00000544336 ATAD5Q96QE3 1844 aa33.82■■■■□ 3
PDCD2-211ENST00000544336 UQCRFS1P1P0C7P4 283 aa33.82■■■■□ 3
PDCD2-211ENST00000544336 FCGRTP55899 365 aa33.82■■■■□ 3
PDCD2-211ENST00000544336 OS9Q13438 667 aaPredicted RBP33.82■■■■□ 3
PDCD2-211ENST00000544336 SNRKQ9NRH2 765 aa33.82■■■■□ 3
PDCD2-211ENST00000544336 GRK4P32298 578 aa33.81■■■■□ 3
PDCD2-211ENST00000544336 PRKCZQ05513 592 aa33.81■■■■□ 3
PDCD2-211ENST00000544336 C1orf115Q9H7X2 142 aa33.81■■■■□ 3
PDCD2-211ENST00000544336 TTC39AQ5SRH9 613 aa33.8■■■■□ 3
PDCD2-211ENST00000544336 TEX11Q8IYF3 940 aa33.8■■■■□ 3
PDCD2-211ENST00000544336 OSBPL5Q9H0X9 879 aaPredicted RBP33.8■■■■□ 3
PDCD2-211ENST00000544336 BIN2Q9UBW5 565 aaPredicted RBP33.8■■■■□ 3
PDCD2-211ENST00000544336 TBC1D12O60347 775 aa33.79■■■■□ 3
PDCD2-211ENST00000544336 NPM3O75607 178 aaKnown RBP33.79■■■■□ 3
PDCD2-211ENST00000544336 MAST2Q6P0Q8 1798 aa33.79■■■■□ 3
PDCD2-211ENST00000544336 POLA2Q14181 598 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 TNNI3KQ59H18 835 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 SH3RF3Q8TEJ3 882 aaPredicted RBP33.78■■■■□ 3
PDCD2-211ENST00000544336 SMCR8Q8TEV9 937 aaPredicted RBP33.78■■■■□ 3
PDCD2-211ENST00000544336 DBNDD2Q9BQY9 259 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 NOL10Q9BSC4 688 aaKnown RBP33.78■■■■□ 3
PDCD2-211ENST00000544336 GABRQQ9UN88 632 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 SLC45A1Q9Y2W3 748 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 FPGT-TNNI3KV9GXZ4 949 aa33.78■■■■□ 3
PDCD2-211ENST00000544336 MAP4K4O95819 1239 aaPredicted RBP33.77■■■■□ 3
PDCD2-211ENST00000544336 HABP4Q5JVS0 413 aaKnown RBP33.77■■■■□ 3
PDCD2-211ENST00000544336 COL2A1P02458 1487 aaPredicted RBP33.76■■■■□ 3
PDCD2-211ENST00000544336 HNRNPUQ00839 825 aaKnown RBP eCLIP33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms