RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ACSBG1Q96GR2 724 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 CORO1BQ9BR76 489 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 TRIM55Q9BYV6 548 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 SOX17Q9H6I2 414 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-207ENST00000544052 CACNA2D2Q9NY47 1150 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 PRKAG3Q9UGI9 489 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 MKL2Q9ULH7 1088 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 TLDC2A0PJX2 215 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 DDX3YO15523 660 aaKnown RBP5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ADAM23O75077 832 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 PROCP04070 461 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 CYP11A1P05108 521 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 GIPRP48546 466 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 POU4F3Q15319 338 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 FAM117BQ6P1L5 589 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ALYREFQ86V81 257 aaKnown RBP5.55□□□□□ -1.52
SCFD1-207ENST00000544052 WFDC8Q8IUA0 241 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 CELF2-AS1Q8N7Q2 184 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 BTBD6Q96KE9 485 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ANTXR1Q9H6X2 564 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ZNRF3Q9ULT6 936 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ZNF862O60290 1169 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 ARL4DP49703 201 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 SNRPNP63162 240 aaKnown RBP5.55□□□□□ -1.52
SCFD1-207ENST00000544052 NBPF6Q5VWK0 638 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 DMRTC2Q8IXT2 367 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-207ENST00000544052 REXO1Q8N1G1 1221 aaKnown RBP5.55□□□□□ -1.52
SCFD1-207ENST00000544052 PLPPR2Q96GM1 343 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 NBPF4Q96M43 638 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 CRBNQ96SW2 442 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 TNKS2Q9H2K2 1166 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 TBX22Q9Y458 520 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
SCFD1-207ENST00000544052 GFRA2O00451 464 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 DLGAP3O95886 979 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 LIG1P18858 919 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 COL9A3Q14050 684 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 PDE3AQ14432 1141 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 WIPI1Q5MNZ9 446 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 ZNF746Q6NUN9 644 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 ZNF662Q6ZS27 426 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 JAZF1Q86VZ6 243 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 NLGN1Q8N2Q7 840 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 SRPK1Q96SB4 655 aaKnown RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 USP26Q9BXU7 913 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 ADAM11O75078 769 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 AMPD1P23109 780 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 WNT8BQ93098 351 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 EHMT1Q9H9B1 1298 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 RRAGCQ9HB90 399 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 R3HCC1Q9Y3T6 440 aaKnown RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 CSADQ9Y600 493 aa5.54□□□□□ -1.52
SCFD1-207ENST00000544052 MRPL42Q9Y6G3 142 aaKnown RBP5.54□□□□□ -1.52
SCFD1-207ENST00000544052 DCDC2CA8MYV0 355 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 U2SURPO15042 1029 aaKnown RBP5.53□□□□□ -1.52
SCFD1-207ENST00000544052 NID1P14543 1247 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 PPP2R5EQ16537 467 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 MICAL1Q8TDZ2 1067 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 KCNK4Q9NYG8 393 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 SIRPGQ9P1W8 387 aa5.53□□□□□ -1.52
SCFD1-207ENST00000544052 LOC100289279A0A1B0GTE1 492 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 DEAF1O75398 565 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-207ENST00000544052 NFE2L2Q16236 605 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-207ENST00000544052 SCARA3Q6AZY7 606 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-207ENST00000544052 C12orf40Q86WS4 652 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 MRFAP1L1Q96HT8 127 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 SNTG2Q9NY99 539 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 KRBA1A5PL33 1030 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 DNAJA2O60884 412 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 ATE1O95260 518 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 HTR3BO95264 441 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 RASA3Q14644 834 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 DIEXFQ68CQ4 756 aaKnown RBP5.52□□□□□ -1.53
SCFD1-207ENST00000544052 ILDR2Q71H61 639 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 KRT82Q9NSB4 513 aa5.52□□□□□ -1.53
SCFD1-207ENST00000544052 PRAMEF27A3QJZ7 478 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 PIK3R2O00459 728 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 TNNI3KQ59H18 835 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 LARP1BQ659C4 914 aaKnown RBP5.51□□□□□ -1.53
SCFD1-207ENST00000544052 SDE2Q6IQ49 451 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 RBBP8NLQ8NC74 664 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-207ENST00000544052 ELMO3Q96BJ8 720 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 DEPDC7Q96QD5 511 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 ACTR10Q9NZ32 417 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 HOXB4P17483 251 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-207ENST00000544052 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-207ENST00000544052 HDXQ7Z353 690 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 MKL1Q969V6 931 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 PUS7Q96PZ0 661 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms