RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 PPP2R3BQ9Y5P8 575 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 MED23Q9ULK4 1368 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 ZSWIM8A7E2V4 1837 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 CCL15-CCL14A0A0B4J2E2 113 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 TLR2O60603 784 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 RNF40O75150 1001 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 DGAT1O75907 488 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 GNRH1P01148 92 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 CCL5P13501 91 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 CTGFP29279 349 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 BMP8BP34820 402 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 PRMT2P55345 433 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 MCM6Q14566 821 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 CCL15Q16663 113 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 PKDCCQ504Y2 493 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 TTLL5Q6EMB2 1281 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 ZBTB38Q8NAP3 1195 aaPredicted RBP6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 MTMR14Q8NCE2 650 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 GDF15Q99988 308 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 COA1Q9GZY4 146 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 ELP3Q9H9T3 547 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 PCDHAC2Q9Y5I4 1007 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 DLG5Q8TDM6 1919 aa6.3□□□□□ -1.4
NPIPB4-219ENST00000543660 ZNF804BA4D1E1 1349 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 AOX1Q06278 1338 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 PPP2R1AP30153 589 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 GRK4P32298 578 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 SLC4A3P48751 1232 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 GTF2A2P52657 109 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 DLGAP5Q15398 846 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 LRIT3Q3SXY7 679 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 CCDC152Q4G0S7 254 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 ANKRD18AQ8IVF6 992 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 SLF2Q8IX21 1173 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 U2AF1L4Q8WU68 220 aaKnown RBP6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 CCDC85AQ96PX6 553 aaPredicted RBP6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR14Q9BWN1 585 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 RNF208Q9H0X6 261 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 CDH23Q9H251 3354 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 CHPF2Q9P2E5 772 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 SRRDQ9UH36 339 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 MINPP1Q9UNW1 487 aa6.29□□□□□ -1.4
NPIPB4-219ENST00000543660 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 C3orf80F5H4A9 247 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PDE8AO60658 829 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 OSBPP22059 807 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 KLRK1P26718 216 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 SLC19A1P41440 591 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 CCT4P50991 539 aaKnown RBP6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 GTF2IP78347 998 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR20EP86478 221 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR20CP86479 221 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR20DP86480 221 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR20BP86481 221 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRR20AP86496 221 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 RASA3Q14644 834 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 KIF22Q14807 665 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 KRT24Q2M2I5 525 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 C17orf99Q6UX52 265 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 TRIM67Q6ZTA4 783 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 NUDT18Q6ZVK8 323 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 CERS5Q8N5B7 392 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 PRMT6Q96LA8 375 aaPredicted RBP6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 BSDC1Q9NW68 430 aaPredicted RBP6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 RIPOR2Q9Y4F9 1068 aa6.28□□□□□ -1.4
NPIPB4-219ENST00000543660 BTBD19C9JJ37 291 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 SGPL1O95470 568 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 PCCAP05165 728 aaPredicted RBP6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 NEFMP07197 916 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 PSMC4P43686 418 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 COPS2P61201 443 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 KCNA1Q09470 495 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 VGLL4Q14135 290 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 CFAP100Q494V2 611 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 RAET1EQ8TD07 263 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 TEPSINQ96N21 525 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 UNC93B1Q9H1C4 597 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 VEZTQ9HBM0 779 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 ZCCHC17Q9NP64 241 aaKnown RBP6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 OTOFQ9HC10 1997 aa6.27□□□□□ -1.41
NPIPB4-219ENST00000543660 MYO1BO43795 1136 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 WDHD1O75717 1129 aaPredicted RBP6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 CETPP11597 493 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 HOXD10P28358 340 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 UBXN2AP68543 259 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 WWC1Q8IX03 1113 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 GUCD1Q96NT3 240 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 CDC5LQ99459 802 aaKnown RBP6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 DBF4Q9UBU7 674 aaPredicted RBP6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 CPA4Q9UI42 421 aa6.26□□□□□ -1.41
NPIPB4-219ENST00000543660 LEMD3Q9Y2U8 911 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms