RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
CALU-206ENST00000542996 PRDM1O75626 825 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 FAM160A1Q05DH4 1040 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 REXO1L1PQ8IX06 675 aa12.4□□□□□ -0.42
CALU-206ENST00000542996 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 SEC23AQ15436 765 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 APPBP2Q92624 585 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 TUBE1Q9UJT0 475 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 ZHX1Q9UKY1 873 aaPredicted RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 TFR2Q9UP52 801 aa12.39□□□□□ -0.43
CALU-206ENST00000542996 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 DYNLL1P63167 89 aaKnown RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 SMYD4Q8IYR2 804 aaPredicted RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
CALU-206ENST00000542996 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 RBAK-RBAKDNI3L0D1 243 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 MYH1P12882 1939 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 FAM237AA0A1B0GTK4 181 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
CALU-206ENST00000542996 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
CALU-206ENST00000542996 NTSR2O95665 410 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
CALU-206ENST00000542996 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
CALU-206ENST00000542996 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
CALU-206ENST00000542996 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
CALU-206ENST00000542996 CHMP4CQ96CF2 233 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 WDR24Q96S15 920 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 IFNKQ9P0W0 207 aa12.38□□□□□ -0.43
CALU-206ENST00000542996 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
CALU-206ENST00000542996 TEX33O43247 280 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
CALU-206ENST00000542996 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
CALU-206ENST00000542996 FBXO2Q9UK22 296 aaPredicted RBP12.37□□□□□ -0.43
CALU-206ENST00000542996 HIP1O00291 1037 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 SASH3O75995 380 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 SARSP49591 514 aaKnown RBP12.37□□□□□ -0.43
CALU-206ENST00000542996 EPSTI1Q96J88 318 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 ME1P48163 572 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 LAMB1P07942 1786 aa12.37□□□□□ -0.43
CALU-206ENST00000542996 CYP2D6P10635 497 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 CDC25AP30304 524 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 GYG1P46976 350 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 SLC39A14Q15043 492 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
CALU-206ENST00000542996 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
CALU-206ENST00000542996 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 STAMQ92783 540 aa12.36□□□□□ -0.43
CALU-206ENST00000542996 SAMSN1Q9NSI8 373 aaKnown RBP12.36□□□□□ -0.43
CALU-206ENST00000542996 ZNF18P17022 549 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 TBX2Q13207 712 aaPredicted RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 ANO1Q5XXA6 986 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 PPP1R13BQ96KQ4 1090 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 SKILP12757 684 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 TM4SF1P30408 202 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 OSBPL5Q9H0X9 879 aaPredicted RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 NAP1L2Q9ULW6 460 aaPredicted RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 IDH1O75874 414 aaKnown RBP12.35□□□□□ -0.43
CALU-206ENST00000542996 MBD4O95243 580 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 RESP18Q5W5W9 173 aa12.35□□□□□ -0.43
CALU-206ENST00000542996 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms