RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 POLIQ9UNA4 740 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 AKAP2Q9Y2D5 859 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 CDK13Q14004 1512 aaKnown RBP5.05□□□□□ -1.6
SNHG1-219ENST00000542112 EHBP1L1Q8N3D4 1523 aa5.05□□□□□ -1.6
SNHG1-219ENST00000542112 ANKRD30AQ9BXX3 1397 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 SPAG9O60271 1321 aaKnown RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ELP1O95163 1332 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 SOS2Q07890 1332 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ERICH4A6NGS2 130 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ERLIN1O75477 346 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 P4HBP07237 508 aaKnown RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ATP4AP20648 1035 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 VAMP1P23763 118 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 MRPL12P52815 198 aaKnown RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 EIF5P55010 431 aaKnown RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 CORO7P57737 925 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 DDR1Q08345 913 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 PKDCCQ504Y2 493 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 DNAJC21Q5F1R6 531 aaKnown RBP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 KRBA2Q6ZNG9 492 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 NME8Q8N427 588 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 SAMD3Q8N6K7 520 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC112Q8NEF3 446 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 C17orf50Q8WW18 174 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 PIK3R5Q8WYR1 880 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ZBTB9Q96C00 473 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ERO1AQ96HE7 468 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 KIF2CQ99661 725 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 CRACR2AQ9BSW2 395 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 JADE2Q9NQC1 790 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 BATF3Q9NR55 127 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ZNF446Q9NWS9 450 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 CLIP2Q9UDT6 1046 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 ITGB1BP2Q9UKP3 347 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 BCS1LQ9Y276 419 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNHG1-219ENST00000542112 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
SNHG1-219ENST00000542112 PLB1Q6P1J6 1458 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 EXOC5O00471 708 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 NRG2O14511 850 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 AXIN1O15169 862 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 SNUPNO95149 360 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 IGHA2P01877 340 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 YY1P25490 414 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 MSX1P28360 303 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 NF2P35240 595 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ACTN2P35609 894 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ARSDP51689 593 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 RPS6KA3P51812 740 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ATP2B2Q01814 1243 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 MLECQ14165 292 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 DHX8Q14562 1220 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 SF3A1Q15459 793 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ZSCAN23Q3MJ62 389 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ARSJQ5FYB0 599 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 GORABQ5T7V8 394 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 GBP6Q6ZN66 633 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 TRIM74Q86UV6 250 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 TRIM73Q86UV7 250 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 MORC1Q86VD1 984 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 NCAPG2Q86XI2 1143 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 APLFQ8IW19 511 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 CRIPAKQ8N1N5 446 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 RNF214Q8ND24 703 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 KIAA1524Q8TCG1 905 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 GPR152Q8TDT2 470 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 BHMTQ93088 406 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 NUDT16Q96DE0 195 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 FAXDC2Q96IV6 333 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ZNF396Q96N95 335 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ZIC5Q96T25 663 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 MAF1Q9H063 256 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 TRPV5Q9NQA5 729 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 INCENPQ9NQS7 918 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 TOMM22Q9NS69 142 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 DMGDHQ9UI17 866 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 DYRK1BQ9Y463 629 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 LRRFIP2Q9Y608 721 aaKnown RBP5.03□□□□□ -1.6
SNHG1-219ENST00000542112 KIF14Q15058 1648 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 CDC42BPBQ9Y5S2 1711 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 ANKRD36BQ8N2N9 1353 aa5.03□□□□□ -1.6
SNHG1-219ENST00000542112 PTPRCP08575 1304 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PDLIM1O00151 329 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 GPR182O15218 404 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 KIF5CO60282 957 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 CAND2O75155 1236 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PRPF40AO75400 957 aaKnown RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 FAM200BP0CF97 657 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 MYBL2P10244 700 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 BMP1P13497 986 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PECAM1P16284 738 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 EPB42P16452 691 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 ELF1P32519 619 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 MAPK8P45983 427 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 IDH3AP50213 366 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 NAP1L1P55209 391 aaKnown RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 SLC8A3P57103 927 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 CCT2P78371 535 aaKnown RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 LAPTM4AQ15012 233 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms