RNA–Protein interactions for RNA: ENST00000542108.1

KNOP1P1-201, Transcript of lysine rich nucleolar protein 1 pseudogene 1, humanhuman

BASIC

Gene KNOP1P1, Length 989 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P1-201ENST00000542108 SSH3Q8TE77 659 aa16.31■□□□□ 0.2
KNOP1P1-201ENST00000542108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
KNOP1P1-201ENST00000542108 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
KNOP1P1-201ENST00000542108 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 CENPFP49454 3210 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 CXCL11O14625 94 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 IGSF3O75054 1194 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 MIER1Q8N108 512 aa16.3■□□□□ 0.2
KNOP1P1-201ENST00000542108 PRMT2P55345 433 aa16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 RHBDL3P58872 404 aa16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 ATP8B2P98198 1209 aa16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
KNOP1P1-201ENST00000542108 ZBED9Q6R2W3 1325 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 PDHXO00330 501 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 TBC1D12O60347 775 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 MCAMP43121 646 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 CAP1Q01518 475 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 C17orf99Q6UX52 265 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
KNOP1P1-201ENST00000542108 ADGRA2Q96PE1 1338 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 PTPRAP18433 802 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 PICALMQ13492 652 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 MOGSQ13724 837 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 ITPRIPQ8IWB1 547 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 ZNF333Q96JL9 665 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 RAI14Q9P0K7 980 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
KNOP1P1-201ENST00000542108 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
KNOP1P1-201ENST00000542108 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 A0A0G2JLL6 359 aaPredicted RBP16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 TBC1D9Q6ZT07 1266 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 PRRT2Q7Z6L0 340 aaPredicted RBP16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 PTCH2Q9Y6C5 1203 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
KNOP1P1-201ENST00000542108 SLC34A2O95436 690 aa16.25■□□□□ 0.19
KNOP1P1-201ENST00000542108 PLCG2P16885 1265 aa16.25■□□□□ 0.19
KNOP1P1-201ENST00000542108 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
KNOP1P1-201ENST00000542108 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
KNOP1P1-201ENST00000542108 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
KNOP1P1-201ENST00000542108 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 BAG3O95817 575 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 RLBP1P12271 317 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 HOXD10P28358 340 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 GPAT2Q6NUI2 795 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 CPA4Q9UI42 421 aa16.24■□□□□ 0.19
KNOP1P1-201ENST00000542108 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 C1orf115Q9H7X2 142 aa16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
KNOP1P1-201ENST00000542108 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 PTPRFP10586 1907 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 BCRP11274 1271 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 MS4A1P11836 297 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 PSMC4P43686 418 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 PPP4CP60510 307 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
KNOP1P1-201ENST00000542108 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 CEP85Q6P2H3 762 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 CERS3Q8IU89 383 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 SNRKQ9NRH2 765 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 PI4KBQ9UBF8 816 aa16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
KNOP1P1-201ENST00000542108 BRCA2P51587 3418 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms