RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 PTPRTO14522 1441 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 NLRP12P59046 1061 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 PDCLQ13371 301 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 INTS8Q75QN2 995 aaKnown RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 EIF4E1BA6NMX2 242 aaKnown RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 EGFL6Q8IUX8 553 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 IFT20Q8IY31 132 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 STMN2Q93045 179 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 FAM167BQ9BTA0 163 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 CABP4P57796 275 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 C8orf58Q8NAV2 365 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 EYA1Q99502 592 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 ECHDC1Q9NTX5 307 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
ERBB2-204ENST00000541774 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
ERBB2-204ENST00000541774 H2AFXP16104 143 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PRPF4BQ13523 1007 aaKnown RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PLA2G4DQ86XP0 818 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 CCDC42Q96M95 316 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 DESP17661 470 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 SPAG1Q07617 926 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 ANKRD24Q8TF21 1146 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 AFMP43652 599 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 KIRREL3Q8IZU9 778 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PSMB7Q99436 277 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
ERBB2-204ENST00000541774 NFE2L3Q9Y4A8 694 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PTPRCP08575 1304 aa12.35□□□□□ -0.43
ERBB2-204ENST00000541774 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-204ENST00000541774 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 MYO1FO00160 1098 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 STX10O60499 249 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
ERBB2-204ENST00000541774 Q6ZUG5 572 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 TTC14Q96N46 770 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 OSBPL9Q96SU4 736 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 NPC1L1Q9UHC9 1359 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-204ENST00000541774 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-204ENST00000541774 PAK2Q13177 524 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 SLC35F6Q8N357 371 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
ERBB2-204ENST00000541774 KIF2CQ99661 725 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 HMG20BQ9P0W2 317 aa12.34□□□□□ -0.43
ERBB2-204ENST00000541774 GCP02774 474 aa12.33□□□□□ -0.43
ERBB2-204ENST00000541774 NBPF9Q3BBW0 867 aa12.33□□□□□ -0.43
ERBB2-204ENST00000541774 RASEFQ8IZ41 740 aa12.33□□□□□ -0.43
ERBB2-204ENST00000541774 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 SNUPNO95149 360 aaKnown RBP12.33□□□□□ -0.44
ERBB2-204ENST00000541774 GUCY2FP51841 1108 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 SH3BGRP55822 239 aaPredicted RBP12.33□□□□□ -0.44
ERBB2-204ENST00000541774 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 TRIM58Q8NG06 486 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
ERBB2-204ENST00000541774 TPCN1Q9ULQ1 816 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 EIF2AK4Q9P2K8 1649 aaKnown RBP12.33□□□□□ -0.44
ERBB2-204ENST00000541774 CEP104O60308 925 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 ZNF202O95125 648 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 DDIT3P35638 169 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
ERBB2-204ENST00000541774 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 KCNK9Q9NPC2 374 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 HECW2Q9P2P5 1572 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 ARMCX6Q7L4S7 300 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 TAOK3Q9H2K8 898 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
ERBB2-204ENST00000541774 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-204ENST00000541774 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 CREB3L3Q68CJ9 461 aa12.32□□□□□ -0.44
ERBB2-204ENST00000541774 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms