RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 DYNLL1P63167 89 aaKnown RBP20.55■□□□□ 0.88
CD9-209ENST00000540891 VGLL4Q14135 290 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 DCAF15Q66K64 600 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 TEX11Q8IYF3 940 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 HOOK2Q96ED9 719 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 ELP3Q9H9T3 547 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 ECHDC1Q9NTX5 307 aa20.55■□□□□ 0.88
CD9-209ENST00000540891 BAG3O95817 575 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 SLURP2P0DP57 97 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 CTCFP49711 727 aaPredicted RBP20.54■□□□□ 0.88
CD9-209ENST00000540891 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 WRNIP1Q96S55 665 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 NOL10Q9BSC4 688 aaKnown RBP20.54■□□□□ 0.88
CD9-209ENST00000540891 BEGAINQ9BUH8 593 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 ZNF341Q9BYN7 854 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 OSBPL5Q9H0X9 879 aaPredicted RBP20.54■□□□□ 0.88
CD9-209ENST00000540891 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 ZNF112Q9UJU3 913 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 SNCAIPQ9Y6H5 919 aa20.54■□□□□ 0.88
CD9-209ENST00000540891 ZBTB48P10074 688 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
CD9-209ENST00000540891 TSHZ3Q63HK5 1081 aa20.53■□□□□ 0.88
CD9-209ENST00000540891 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 REM2Q8IYK8 340 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 MIGA1Q8NAN2 632 aa20.53■□□□□ 0.88
CD9-209ENST00000540891 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 ZKSCAN4Q969J2 545 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 TSKSQ9UJT2 592 aa20.53■□□□□ 0.88
CD9-209ENST00000540891 COL2A1P02458 1487 aaPredicted RBP20.53■□□□□ 0.88
CD9-209ENST00000540891 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 PDE6AP16499 860 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 PLCG2P16885 1265 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 INPP5BP32019 993 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 TM4SF4P48230 202 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 LBX1P52954 281 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 COL13A1Q5TAT6 717 aaPredicted RBP20.52■□□□□ 0.88
CD9-209ENST00000540891 TMED8Q6PL24 325 aaPredicted RBP20.52■□□□□ 0.88
CD9-209ENST00000540891 GCC1Q96CN9 775 aa20.52■□□□□ 0.88
CD9-209ENST00000540891 LAMB1P07942 1786 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 CA12O43570 354 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 SLC9C2Q5TAH2 1124 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 OPTNQ96CV9 577 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 RIOK1Q9BRS2 568 aaKnown RBP20.51■□□□□ 0.87
CD9-209ENST00000540891 RNF186Q9NXI6 227 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 CSADQ9Y600 493 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 CDK5RAP2Q96SN8 1893 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 FLT1P17948 1338 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 SALL3Q9BXA9 1300 aa20.51■□□□□ 0.87
CD9-209ENST00000540891 SPDYE5A6NIY4 337 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 PHF20L1A8MW92 1017 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 IGHDP01880 384 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 CHGBP05060 677 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
CD9-209ENST00000540891 SLFNL1Q499Z3 407 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 TGFBRAP1Q8WUH2 860 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 PRDM10Q9NQV6 1147 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 FOCADQ5VW36 1801 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 ZNF532Q9HCE3 1301 aa20.5■□□□□ 0.87
CD9-209ENST00000540891 ADD2P35612 726 aa20.49■□□□□ 0.87
CD9-209ENST00000540891 SMC5Q8IY18 1101 aa20.49■□□□□ 0.87
CD9-209ENST00000540891 PI4K2BQ8TCG2 481 aa20.49■□□□□ 0.87
CD9-209ENST00000540891 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
CD9-209ENST00000540891 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
CD9-209ENST00000540891 MANSC4A6NHS7 340 aaPredicted RBP20.48■□□□□ 0.87
CD9-209ENST00000540891 TRPA1O75762 1119 aa20.48■□□□□ 0.87
CD9-209ENST00000540891 SREBF2Q12772 1141 aa20.48■□□□□ 0.87
CD9-209ENST00000540891 NOL9Q5SY16 702 aaKnown RBP20.48■□□□□ 0.87
CD9-209ENST00000540891 OTUD5Q96G74 571 aa20.48■□□□□ 0.87
CD9-209ENST00000540891 TTC41PQ6P2S7 1318 aa20.48■□□□□ 0.87
CD9-209ENST00000540891 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
CD9-209ENST00000540891 FAM196BA6NMK8 535 aa20.47■□□□□ 0.87
CD9-209ENST00000540891 TBC1D12O60347 775 aa20.47■□□□□ 0.87
CD9-209ENST00000540891 ERO1BQ86YB8 467 aa20.47■□□□□ 0.87
CD9-209ENST00000540891 CERS3Q8IU89 383 aa20.47■□□□□ 0.87
CD9-209ENST00000540891 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
CD9-209ENST00000540891 RWDD1Q9H446 243 aaPredicted RBP20.47■□□□□ 0.87
CD9-209ENST00000540891 MAGEB6P1A0A0J9YX57 407 aa20.46■□□□□ 0.87
CD9-209ENST00000540891 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
CD9-209ENST00000540891 MX1P20591 662 aa20.46■□□□□ 0.87
CD9-209ENST00000540891 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.86
CD9-209ENST00000540891 INHBEP58166 350 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 UBE3CQ15386 1083 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 IFNL1Q8IU54 200 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 PTPN18Q99952 460 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 DHX36Q9H2U1 1008 aaKnown RBP20.45■□□□□ 0.86
CD9-209ENST00000540891 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
CD9-209ENST00000540891 IRF6O14896 467 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 PPATQ06203 517 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 PPIL2Q13356 520 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 RRP1BQ14684 758 aaKnown RBP20.44■□□□□ 0.86
CD9-209ENST00000540891 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 KBTBD3Q8NAB2 608 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 BRI3BPQ8WY22 251 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.44■□□□□ 0.86
CD9-209ENST00000540891 DNAJC18Q9H819 358 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms