RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	POLR3G	O15318	223 aa	Predicted RBP	6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PDC	P20941	246 aa		6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TOB2	Q14106	344 aa	Predicted RBP	6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	IQCB1	Q15051	598 aa		6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SYCP1	Q15431	976 aa		6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SYT10	Q6XYQ8	523 aa		6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	HELB	Q8NG08	1087 aa	Predicted RBP	6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TLR7	Q9NYK1	1049 aa	Known RBP	6.56	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	EPB41L2	O43491	1005 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PDE8B	O95263	885 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	USP5	P45974	858 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCAR1	Q8IX12	1150 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	AOPEP	Q8N6M6	819 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ZNRF3	Q9ULT6	936 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ADCY9	O60503	1353 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PKD1L3	Q7Z443	1732 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCZ1B	P86790	482 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCZ1	P86791	482 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PTPN21	Q16825	1174 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TAF3	Q5VWG9	929 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCAR2	Q8N163	923 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	KLHDC4	Q8TBB5	520 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	DCPS	Q96C86	337 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TM6SF1	Q9BZW5	370 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	GOLPH3L	Q9H4A5	285 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ELP1	O95163	1332 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	USP17L3	A6NCW0	530 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	USP17L4	A6NCW7	530 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SLU7	O95391	586 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	RPS12	P25398	132 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	NAA16	Q6N069	864 aa	Predicted RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	NYAP1	Q6ZVC0	841 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	USP17L1	Q7RTZ2	530 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SULF1	Q8IWU6	871 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	AIDA	Q96BJ3	306 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TIGD1	Q96MW7	591 aa		6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CRNKL1	Q9BZJ0	848 aa	Known RBP	6.55	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCDC66	A2RUB6	948 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	BIN1	O00499	593 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	RPS6KB1	P23443	525 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PSMA5	P28066	241 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PDE4C	Q08493	712 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TTLL5	Q6EMB2	1281 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ISM2	Q6H9L7	571 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SMIM5	Q71RC9	77 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	MAP4K1	Q92918	833 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ERO1A	Q96HE7	468 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	EPC1	Q9H2F5	836 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	GPBP1L1	Q9HC44	474 aa	Predicted RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	NHS	Q6T4R5	1651 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TTC41P	Q6P2S7	1318 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783		A0A1B0GUL7	405 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SMC2	O95347	1197 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	MTX1	Q13505	466 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SYNE3	Q6ZMZ3	975 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCDC129	Q6ZRS4	1044 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TEKT1	Q969V4	418 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	EAF2	Q96CJ1	260 aa	Predicted RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	EVI5L	Q96CN4	794 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TMX1	Q9H3N1	280 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	RGPD5	Q99666	1765 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	RTL9	Q8NET4	1388 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	HNRNPH2	P55795	449 aa	Known RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CCT2	P78371	535 aa	Known RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TFCP2	Q12800	502 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SNW1	Q13573	536 aa	Known RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	EAPP	Q56P03	285 aa	Predicted RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	RBM43	Q6ZSC3	357 aa	Known RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PNMA8A	Q86V59	439 aa	Predicted RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	FAM177A1	Q8N128	213 aa	Predicted RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SEC62	Q99442	399 aa	Known RBP	6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SEC31B	Q9NQW1	1179 aa		6.54	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	DOT1L	Q8TEK3	1739 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ERICH2	A1L162	156 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	POLR3D	P05423	398 aa	Predicted RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CSF1R	P07333	972 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CAPN2	P17655	700 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	GTF2I	P78347	998 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	REST	Q13127	1097 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ARHGAP29	Q52LW3	1261 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	TMC6	Q7Z403	805 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	HOMER1	Q86YM7	354 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	DHX40	Q8IX18	779 aa	Known RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	NEK11	Q8NG66	645 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ZNF594	Q96JF6	807 aa	Predicted RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	PSMD1	Q99460	953 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ZCCHC17	Q9NP64	241 aa	Known RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	MINPP1	Q9UNW1	487 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SUGT1	Q9Y2Z0	365 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CRYBG1	Q9Y4K1	1723 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	UBN2	Q6ZU65	1347 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ZC3H4	Q9UPT8	1303 aa	Known RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	SEC31A	O94979	1220 aa	Known RBP	6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	ME1	P48163	572 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	CLCN6	P51797	869 aa		6.53	□□□□□ -1.36
RAPGEF4-215	ENST00000540783	GOLGA8F	Q08AF8	430 aa		6.53	□□□□□ -1.36

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