RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	RTFDC1	Q9BY42	306 aa	Predicted RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	NCOA5	Q9HCD5	579 aa	Known RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	KIF3A	Q9Y496	699 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	ATP6V1D	Q9Y5K8	247 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	MYH2	Q9UKX2	1941 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	VPS37C	A5D8V6	355 aa	Predicted RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	IFIT3	O14879	490 aa	Known RBP	29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	LIFR	P42702	1097 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	FAM184A	Q8NB25	1140 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	C7orf43	Q8WVR3	580 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	ESR2	Q92731	530 aa		29.16	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	CTDNEP1	O95476	244 aa		29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	USP5	P45974	858 aa		29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SGMS1	Q86VZ5	419 aa		29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	STK11IP	Q8N1F8	1099 aa		29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	HPS5	Q9UPZ3	1129 aa		29.15	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	CYP2D7	A0A087X1C5	515 aa		29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	GPR75-ASB3	A0A0A6YYF3	556 aa		29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	PTPDC1	A2A3K4	754 aa		29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	SLC3A2	P08195	630 aa	Known RBP	29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	FBXW7	Q969H0	707 aa		29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	LY9	Q9HBG7	655 aa		29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	ZNF219	Q9P2Y4	722 aa	Predicted RBP	29.14	■■■□□ 2.26
ARL6IP4-218	ENST00000540708	FGR	P09769	529 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	PLCG2	P16885	1265 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	BTD	P43251	543 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	PODN	Q7Z5L7	613 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	DDX11	Q96FC9	970 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	ERICH2	A1L162	156 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	NFXL1	Q6ZNB6	911 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	LAMB1	P07942	1786 aa		29.13	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	GAK	O14976	1311 aa		29.12	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	MCM9	Q9NXL9	1143 aa		29.12	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	MKRN1	Q9UHC7	482 aa	Known RBP	29.12	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	DLEC1	Q9Y238	1755 aa		29.12	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	APOA5	Q6Q788	366 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	LMBRD1	Q9NUN5	540 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	TMTC2	Q8N394	836 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SUPT20H	Q8NEM7	779 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CHAMP1	Q96JM3	812 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	UBAC1	Q9BSL1	405 aa		29.11	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CCDC69	A6NI79	296 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SMIM22	K7EJ46	135 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	WTAP	Q15007	396 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	GRIPAP1	Q4V328	841 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	AMOTL1	Q8IY63	956 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	TTLL6	Q8N841	843 aa		29.1	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CPLX1	O14810	134 aa		29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	ORC4	O43929	436 aa		29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	METAP2	P50579	478 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CDC37L1	Q7L3B6	337 aa		29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SENP2	Q9HC62	589 aa		29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	ZBTB43	O43298	467 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	PRPF40A	O75400	957 aa	Known RBP	29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	GSE1	Q14687	1217 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SYNE3	Q6ZMZ3	975 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CERS5	Q8N5B7	392 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	TGFBRAP1	Q8WUH2	860 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	DBNDD1	Q9H9R9	158 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SLC12A7	Q9Y666	1083 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	SNED1	Q8TER0	1413 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	USP17L8	P0C7I0	530 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	CYP2D6	P10635	497 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	PDE4B	Q07343	736 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	FOXD4L3	Q6VB84	417 aa	Predicted RBP	29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	RAB11FIP4	Q86YS3	637 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708	ZKSCAN3	Q9BRR0	538 aa		29.08	■■■□□ 2.25
ARL6IP4-218	ENST00000540708		H3BQV1	296 aa		29.07	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	IFFO2	Q5TF58	517 aa		29.07	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	C12orf60	Q5U649	245 aa		29.07	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	TEX11	Q8IYF3	940 aa		29.07	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	C21orf2	O43822	256 aa		29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	RANBP6	O60518	1105 aa	Known RBP	29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	NT5C2	P49902	561 aa		29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	TTF2	Q9UNY4	1162 aa	Known RBP	29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	DAGLA	Q9Y4D2	1042 aa		29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	CPLX2	Q6PUV4	134 aa	Known RBP	29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	MICU3	Q86XE3	530 aa		29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	DDX49	Q9Y6V7	483 aa	Known RBP	29.06	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	NAV1	Q8NEY1	1877 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	ECE2	O60344	883 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	PRDM1	O75626	825 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	CDKL5	O76039	1030 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	DPEP1	P16444	411 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	RHBDL3	P58872	404 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	FKBP1A	P62942	108 aa	Known RBP	29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	KIAA2012	Q0VF49	1180 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	IQCA1	Q86XH1	822 aa		29.05	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	GOLGA8A	A7E2F4	631 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	KLHL40	Q2TBA0	621 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	CCDC93	Q567U6	631 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	STRIP1	Q5VSL9	837 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	MAPKAPK5	Q8IW41	473 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	TNKS	O95271	1327 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708	KIF13B	Q9NQT8	1826 aa		29.04	■■■□□ 2.24
ARL6IP4-218	ENST00000540708		F8W031	263 aa	Predicted RBP	29.03	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms