RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-209ENST00000540659 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 EYA3Q99504 573 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 ZKSCAN3Q9BRR0 538 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 KRT23Q9C075 422 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 COA1Q9GZY4 146 aa11.24□□□□□ -0.61
PAAF1-209ENST00000540659 NCOA5Q9HCD5 579 aaKnown RBP11.24□□□□□ -0.61
PAAF1-209ENST00000540659 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
PAAF1-209ENST00000540659 GOLGA8BA8MQT2 603 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 F8W031 263 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-209ENST00000540659 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-209ENST00000540659 KDM4AO75164 1064 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
PAAF1-209ENST00000540659 BTDP43251 543 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 RASSF7Q02833 373 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 LARP1BQ659C4 914 aaKnown RBP11.23□□□□□ -0.61
PAAF1-209ENST00000540659 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 NFXL1Q6ZNB6 911 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
PAAF1-209ENST00000540659 IFIT3O14879 490 aaKnown RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 C21orf2O43822 256 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 BAG3O95817 575 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 LDHCP07864 332 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 CYP2D6P10635 497 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 EVX2Q03828 476 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 FAM184AQ8NB25 1140 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 DICER1Q9UPY3 1922 aaKnown RBP11.22□□□□□ -0.61
PAAF1-209ENST00000540659 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
PAAF1-209ENST00000540659 MYH1P12882 1939 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 FAM205AQ6ZU69 1335 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 USP17L21D6R901 530 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 NFKBIEO00221 500 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 TRAK2O60296 914 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 F13A1P00488 732 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 RXRAP19793 462 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 PTMSP20962 102 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 TGFBRAP1Q8WUH2 860 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 TMEM87BQ96K49 555 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 RTFDC1Q9BY42 306 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-209ENST00000540659 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 SENP2Q9HC62 589 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.61
PAAF1-209ENST00000540659 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
PAAF1-209ENST00000540659 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.61
PAAF1-209ENST00000540659 SNED1Q8TER0 1413 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 ERICH2A1L162 156 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 CCDC69A6NI79 296 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 PRDM1O75626 825 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 CTDNEP1O95476 244 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 WTAPQ15007 396 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 AOC3Q16853 763 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 GIMAP6Q6P9H5 292 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 FBXL16Q8N461 479 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 NSUN7Q8NE18 718 aaKnown RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
PAAF1-209ENST00000540659 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
PAAF1-209ENST00000540659 H3BQV1 296 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 ECE2O60344 883 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
PAAF1-209ENST00000540659 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
PAAF1-209ENST00000540659 SCNN1DP51172 638 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms