RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
NPC1-202ENST00000540608 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 FOXP4Q8IVH2 680 aaPredicted RBP14.15□□□□□ -0.14
NPC1-202ENST00000540608 SENP2Q9HC62 589 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 PIH1D3Q9NQM4 214 aaKnown RBP14.15□□□□□ -0.14
NPC1-202ENST00000540608 DNAI1Q9UI46 699 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 B4E1Z4 1266 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 CNNM3Q8NE01 707 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 GREM2Q9H772 168 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
NPC1-202ENST00000540608 FANCLQ9NW38 375 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 TOP1P11387 765 aaKnown RBP14.14□□□□□ -0.15
NPC1-202ENST00000540608 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
NPC1-202ENST00000540608 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 UTP14AQ9BVJ6 771 aaKnown RBP14.14□□□□□ -0.15
NPC1-202ENST00000540608 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
NPC1-202ENST00000540608 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 PCDHA5Q9Y5H7 936 aa14.14□□□□□ -0.15
NPC1-202ENST00000540608 CDHR2Q9BYE9 1310 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 ZNF532Q9HCE3 1301 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 RANBP6O60518 1105 aaKnown RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 ITGA6P23229 1130 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 MDM2Q00987 491 aaPredicted RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 ALX1Q15699 326 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 NFXL1Q6ZNB6 911 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 TEX13AQ9BXU3 409 aaPredicted RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 UBN2Q6ZU65 1347 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 GOLGA8AA7E2F4 631 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 ZSCAN12O43309 604 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 IDH1O75874 414 aaKnown RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 STARD3NLO95772 234 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 LIFRP42702 1097 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
NPC1-202ENST00000540608 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 STRBPQ96SI9 672 aaKnown RBP14.13□□□□□ -0.15
NPC1-202ENST00000540608 TCRBV5S4A2TA0A5A2 114 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 TMEM232C9JQI7 657 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 CLCN6P51797 869 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 FAM193AP78312 1265 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
NPC1-202ENST00000540608 ARHGAP29Q52LW3 1261 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 HOOK1Q9UJC3 728 aaKnown RBP14.12□□□□□ -0.15
NPC1-202ENST00000540608 TBC1D2BQ9UPU7 963 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 ARHGAP6O43182 974 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 PDE6AP16499 860 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 BMP6P22004 513 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 SLC4A9Q96Q91 983 aa14.12□□□□□ -0.15
NPC1-202ENST00000540608 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.12□□□□□ -0.15
NPC1-202ENST00000540608 FMNL1O95466 1100 aaPredicted RBP14.11□□□□□ -0.15
NPC1-202ENST00000540608 PDE4BQ07343 736 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 TBX2Q13207 712 aaPredicted RBP14.11□□□□□ -0.15
NPC1-202ENST00000540608 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 TMEM139Q8IV31 216 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 WASF1Q92558 559 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 UBXN4Q92575 508 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 SLC26A6Q9BXS9 759 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 INTS13Q9NVM9 706 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
NPC1-202ENST00000540608 PDE8BO95263 885 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
NPC1-202ENST00000540608 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 ZSWIM5Q9P217 1185 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 CTSWP56202 376 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 NT5DC1Q5TFE4 455 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 AIDAQ96BJ3 306 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 MYL10Q9BUA6 226 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
NPC1-202ENST00000540608 ECM29Q5VYK3 1845 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 FANCGO15287 622 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 URI1O94763 535 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 IFNAR1P17181 557 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 GOLGA8FQ08AF8 430 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 GOLGA8DPQ0D2H9 430 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 INCENPQ9NQS7 918 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 MAN1B1Q9UKM7 699 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 ITGB4P16144 1822 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 VWA3AA6NCI4 1184 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 GOLGA6L9A6NEM1 432 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 EFCAB8A8MWE9 144 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 UBE2Q2LH0YL09 131 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 IFIT3O14879 490 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms