RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
UBE3B-212ENST00000540230 CASP8AP2Q9UKL3 1982 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 CA12O43570 354 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 INPP5BP32019 993 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3B-212ENST00000540230 OPTNQ96CV9 577 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
UBE3B-212ENST00000540230 ZBTB48P10074 688 aaPredicted RBP18.36■□□□□ 0.53
UBE3B-212ENST00000540230 CYP7A1P22680 504 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 TM4SF4P48230 202 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 DYNLL1P63167 89 aaKnown RBP18.36■□□□□ 0.53
UBE3B-212ENST00000540230 DCAF15Q66K64 600 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
UBE3B-212ENST00000540230 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 MAGEB6Q8N7X4 407 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
UBE3B-212ENST00000540230 SIPA1L1O43166 1804 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 GOLIM4O00461 696 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 PPP4CP60510 307 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 HOOK2Q96ED9 719 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 SAGE1Q9NXZ1 904 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 SUPT16HQ9Y5B9 1047 aaKnown RBP18.35■□□□□ 0.53
UBE3B-212ENST00000540230 CSADQ9Y600 493 aa18.35■□□□□ 0.53
UBE3B-212ENST00000540230 ATP5JP18859 108 aa18.34■□□□□ 0.53
UBE3B-212ENST00000540230 REM2Q8IYK8 340 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-212ENST00000540230 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
UBE3B-212ENST00000540230 OSBPL5Q9H0X9 879 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-212ENST00000540230 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
UBE3B-212ENST00000540230 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.53
UBE3B-212ENST00000540230 SREBF2Q12772 1141 aa18.33■□□□□ 0.53
UBE3B-212ENST00000540230 TSHZ3Q63HK5 1081 aa18.33■□□□□ 0.53
UBE3B-212ENST00000540230 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.53
UBE3B-212ENST00000540230 OTUD5Q96G74 571 aa18.33■□□□□ 0.53
UBE3B-212ENST00000540230 NOL10Q9BSC4 688 aaKnown RBP18.33■□□□□ 0.53
UBE3B-212ENST00000540230 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.52
UBE3B-212ENST00000540230 MANSC4A6NHS7 340 aaPredicted RBP18.33■□□□□ 0.52
UBE3B-212ENST00000540230 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 FAM196BA6NMK8 535 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
UBE3B-212ENST00000540230 IGSF3O75054 1194 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 BAG3O95817 575 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
UBE3B-212ENST00000540230 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 SLFNL1Q499Z3 407 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 HAUS7Q99871 368 aa18.33■□□□□ 0.52
UBE3B-212ENST00000540230 FLT1P17948 1338 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 TBC1D8O95759 1140 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 CHGBP05060 677 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 PDE6AP16499 860 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 MAP3K10Q02779 954 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 TTF1Q15361 905 aaPredicted RBP18.32■□□□□ 0.52
UBE3B-212ENST00000540230 MAPKAPK5Q8IW41 473 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 TNS4Q8IZW8 715 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 PTPN18Q99952 460 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
UBE3B-212ENST00000540230 IFNL1Q8IU54 200 aa18.31■□□□□ 0.52
UBE3B-212ENST00000540230 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-212ENST00000540230 MYH7P12883 1935 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 PLCG2P16885 1265 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 ERO1BQ86YB8 467 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
UBE3B-212ENST00000540230 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
UBE3B-212ENST00000540230 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
UBE3B-212ENST00000540230 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
UBE3B-212ENST00000540230 IRF6O14896 467 aa18.29■□□□□ 0.52
UBE3B-212ENST00000540230 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
UBE3B-212ENST00000540230 NOL9Q5SY16 702 aaKnown RBP18.29■□□□□ 0.52
UBE3B-212ENST00000540230 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
UBE3B-212ENST00000540230 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
UBE3B-212ENST00000540230 MYH1P12882 1939 aa18.29■□□□□ 0.52
UBE3B-212ENST00000540230 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
UBE3B-212ENST00000540230 INHBEP58166 350 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 SAP30BPQ9UHR5 308 aaKnown RBP18.28■□□□□ 0.52
UBE3B-212ENST00000540230 PHIPQ8WWQ0 1821 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 CCL15-CCL14A0A0B4J2E2 113 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 PPIL2Q13356 520 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 RRP1BQ14684 758 aaKnown RBP18.28■□□□□ 0.52
UBE3B-212ENST00000540230 CCL15Q16663 113 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 PALD1Q9ULE6 856 aa18.28■□□□□ 0.52
UBE3B-212ENST00000540230 ATAD5Q96QE3 1844 aa18.27■□□□□ 0.52
UBE3B-212ENST00000540230 TBC1D12O60347 775 aa18.27■□□□□ 0.51
UBE3B-212ENST00000540230 ADD2P35612 726 aa18.27■□□□□ 0.51
UBE3B-212ENST00000540230 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.51
UBE3B-212ENST00000540230 PPATQ06203 517 aa18.27■□□□□ 0.51
UBE3B-212ENST00000540230 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.51
UBE3B-212ENST00000540230 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.51
UBE3B-212ENST00000540230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.27■□□□□ 0.51
UBE3B-212ENST00000540230 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.51
UBE3B-212ENST00000540230 SALL3Q9BXA9 1300 aa18.26■□□□□ 0.51
UBE3B-212ENST00000540230 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms