RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 MAP4K4O95819 1239 aaPredicted RBP22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 GJA5P36382 358 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 MAP3K9P80192 1104 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 TEX11Q8IYF3 940 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 MIGA1Q8NAN2 632 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 AIDAQ96BJ3 306 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 ECHDC1Q9NTX5 307 aa22.25■■□□□ 1.15
SNRPA1-203ENST00000540017 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 BAG3O95817 575 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 IGHDP01880 384 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 VGLL4Q14135 290 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 HOOK2Q96ED9 719 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 WNK4Q96J92 1243 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 NOL10Q9BSC4 688 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 ELP3Q9H9T3 547 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 TSKSQ9UJT2 592 aa22.24■■□□□ 1.15
SNRPA1-203ENST00000540017 PDE6AP16499 860 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 SLC9C2Q5TAH2 1124 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 DCAF15Q66K64 600 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 ZSCAN29Q8IWY8 852 aaPredicted RBP22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 CNKSR2Q8WXI2 1034 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 ZKSCAN4Q969J2 545 aaPredicted RBP22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 WRNIP1Q96S55 665 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 ZNF341Q9BYN7 854 aa22.23■■□□□ 1.15
SNRPA1-203ENST00000540017 CDK5RAP2Q96SN8 1893 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 TCRBV5S4A2TA0A5A2 114 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 CHGBP05060 677 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 HSPA8P11142 646 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 INPP5BP32019 993 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 TGFBRAP1Q8WUH2 860 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 GCC1Q96CN9 775 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 OSBPL5Q9H0X9 879 aaPredicted RBP22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 ZNF112Q9UJU3 913 aa22.22■■□□□ 1.15
SNRPA1-203ENST00000540017 PLCG2P16885 1265 aa22.21■■□□□ 1.15
SNRPA1-203ENST00000540017 CTCFP49711 727 aaPredicted RBP22.21■■□□□ 1.15
SNRPA1-203ENST00000540017 BEGAINQ9BUH8 593 aa22.21■■□□□ 1.15
SNRPA1-203ENST00000540017 SNCAIPQ9Y6H5 919 aa22.21■■□□□ 1.15
SNRPA1-203ENST00000540017 LBX1P52954 281 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 MAP3K10Q02779 954 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 MAPKAPK5Q8IW41 473 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 OPTNQ96CV9 577 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 RIOK1Q9BRS2 568 aaKnown RBP22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 RNF186Q9NXI6 227 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 CSADQ9Y600 493 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 SALL3Q9BXA9 1300 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 ZNF532Q9HCE3 1301 aa22.2■■□□□ 1.14
SNRPA1-203ENST00000540017 PHF20L1A8MW92 1017 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 ZBTB48P10074 688 aaPredicted RBP22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 TM4SF4P48230 202 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 TMED8Q6PL24 325 aaPredicted RBP22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 PI4K2BQ8TCG2 481 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 GPATCH3Q96I76 525 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 FLT1P17948 1338 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 COL2A1P02458 1487 aaPredicted RBP22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 FOCADQ5VW36 1801 aa22.19■■□□□ 1.14
SNRPA1-203ENST00000540017 FAM196BA6NMK8 535 aa22.18■■□□□ 1.14
SNRPA1-203ENST00000540017 ADD2P35612 726 aa22.18■■□□□ 1.14
SNRPA1-203ENST00000540017 COL13A1Q5TAT6 717 aaPredicted RBP22.18■■□□□ 1.14
SNRPA1-203ENST00000540017 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
SNRPA1-203ENST00000540017 TRPA1O75762 1119 aa22.17■■□□□ 1.14
SNRPA1-203ENST00000540017 REM2Q8IYK8 340 aaPredicted RBP22.17■■□□□ 1.14
SNRPA1-203ENST00000540017 LAMB1P07942 1786 aa22.17■■□□□ 1.14
SNRPA1-203ENST00000540017 SIPA1L1O43166 1804 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 MAGEB6P1A0A0J9YX57 407 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 SPDYE5A6NIY4 337 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 CA12O43570 354 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 MX1P20591 662 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 OTUD5Q96G74 571 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 MS4A4AQ96JQ5 239 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 SAP30BPQ9UHR5 308 aaKnown RBP22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
SNRPA1-203ENST00000540017 MANSC4A6NHS7 340 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-203ENST00000540017 TBC1D12O60347 775 aa22.15■■□□□ 1.14
SNRPA1-203ENST00000540017 B4GALNT3Q6L9W6 998 aa22.15■■□□□ 1.14
SNRPA1-203ENST00000540017 ERO1BQ86YB8 467 aa22.15■■□□□ 1.14
SNRPA1-203ENST00000540017 LNPKQ9C0E8 428 aa22.15■■□□□ 1.14
SNRPA1-203ENST00000540017 SREBF2Q12772 1141 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 SLC4A8Q2Y0W8 1093 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 NOL9Q5SY16 702 aaKnown RBP22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 CERS3Q8IU89 383 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 LCORLQ8N3X6 602 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 KBTBD3Q8NAB2 608 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 PRDM10Q9NQV6 1147 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 SAGE1Q9NXZ1 904 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 ZBTB47Q9UFB7 747 aaPredicted RBP22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 MYH7P12883 1935 aa22.14■■□□□ 1.13
SNRPA1-203ENST00000540017 IGF2BP3O00425 579 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 USP5P45974 858 aa22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 RRP1BQ14684 758 aaKnown RBP22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 UBE3CQ15386 1083 aa22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 PTPN18Q99952 460 aa22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 DHX36Q9H2U1 1008 aaKnown RBP22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 ARMT1Q9H993 441 aa22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNRPA1-203ENST00000540017 STAP2Q9UGK3 403 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms