RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 LRP2BPQ9P2M1 347 aa11.5□□□□□ -0.57
MDH1-215ENST00000539945 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 IGSF3O75054 1194 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 FGAP02671 866 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 SRGNP10124 158 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 CPA1P15085 419 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 NPR1P16066 1061 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 BAG6P46379 1132 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 GPSM2P81274 684 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 SF3B2Q13435 895 aaKnown RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 NFKBIBQ15653 356 aa11.49□□□□□ -0.57
MDH1-215ENST00000539945 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 ZSCAN31Q96LW9 406 aaPredicted RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 IQSEC3Q9UPP2 1182 aaPredicted RBP11.49□□□□□ -0.57
MDH1-215ENST00000539945 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 ALX1Q15699 326 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
MDH1-215ENST00000539945 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 ZMYM6O95789 1325 aa11.48□□□□□ -0.57
MDH1-215ENST00000539945 LRRC37AA6NMS7 1700 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 E7EWF7 191 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 FRAT2O75474 233 aaPredicted RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 GNAT2P19087 354 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 STOX1Q6ZVD7 989 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 NOL8Q76FK4 1167 aaKnown RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 TDRD7Q8NHU6 1098 aaKnown RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 SH2B1Q9NRF2 756 aaPredicted RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 ABCF2Q9UG63 623 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
MDH1-215ENST00000539945 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
MDH1-215ENST00000539945 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
MDH1-215ENST00000539945 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
MDH1-215ENST00000539945 MBD4O95243 580 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 NUCB2P80303 420 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
MDH1-215ENST00000539945 DHX32Q7L7V1 743 aaKnown RBP11.46□□□□□ -0.57
MDH1-215ENST00000539945 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 GGA1Q9UJY5 639 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.57
MDH1-215ENST00000539945 LTBP1Q14766 1721 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 A0A0G2JLW4 131 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 UFL1O94874 794 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 CYP7A1P22680 504 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 EXOSC10Q01780 885 aaKnown RBP11.45□□□□□ -0.58
MDH1-215ENST00000539945 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
MDH1-215ENST00000539945 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
MDH1-215ENST00000539945 TBC1D16Q8TBP0 767 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 MASTLQ96GX5 879 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
MDH1-215ENST00000539945 ZNF213O14771 459 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 APPP05067 770 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 IL1R1P14778 569 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 PRSS12P56730 875 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
MDH1-215ENST00000539945 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 NAA16Q6N069 864 aaPredicted RBP11.44□□□□□ -0.58
MDH1-215ENST00000539945 DEFB132Q7Z7B7 95 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 CCDC125Q86Z20 511 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 FBXL16Q8N461 479 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 NSUN4Q96CB9 384 aaKnown RBP11.44□□□□□ -0.58
MDH1-215ENST00000539945 ARMT1Q9H993 441 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 POLLQ9UGP5 575 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.44□□□□□ -0.58
MDH1-215ENST00000539945 LAMA4Q16363 1823 aa11.44□□□□□ -0.58
MDH1-215ENST00000539945 MAGEB6P1A0A0J9YX57 407 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 GSG1L2A8MUP6 293 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 MECOMQ03112 1051 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 ME3Q16798 604 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 CLEC17AQ6ZS10 378 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 IFNL3Q8IZI9 196 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 LCORLQ8N3X6 602 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 TNPO1Q92973 898 aaKnown RBP11.43□□□□□ -0.58
MDH1-215ENST00000539945 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 RIOK1Q9BRS2 568 aaKnown RBP11.43□□□□□ -0.58
MDH1-215ENST00000539945 AGXT2Q9BYV1 514 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 CD209Q9NNX6 404 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 COL11A2P13942 1736 aaPredicted RBP11.43□□□□□ -0.58
MDH1-215ENST00000539945 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
MDH1-215ENST00000539945 H0YIN7 160 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 RNF40O75150 1001 aa11.43□□□□□ -0.58
MDH1-215ENST00000539945 LARGE1O95461 756 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms