RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
CD4-209ENST00000539492 LOC285556D6RIA3 1793 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 CDK5RAP2Q96SN8 1893 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 PDS5AQ29RF7 1337 aaKnown RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 A0A0G2JLL6 359 aaPredicted RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 H0YGN5 161 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 GJB1P08034 283 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 CT47B1P0C2W7 299 aaPredicted RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 UBXN2AP68543 259 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 PRKCZQ05513 592 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 CCDC102BQ68D86 513 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 GPAT2Q6NUI2 795 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 PRRT2Q7Z6L0 340 aaPredicted RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 ZFPM1Q8IX07 1006 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 SLAIN1Q8ND83 568 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 API5Q9BZZ5 524 aaKnown RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 PA2G4Q9UQ80 394 aaKnown RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 SLC45A1Q9Y2W3 748 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 LRRFIP2Q9Y608 721 aaKnown RBP10.09□□□□□ -0.79
CD4-209ENST00000539492 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
CD4-209ENST00000539492 MYO5AQ9Y4I1 1855 aaKnown RBP10.08□□□□□ -0.8
CD4-209ENST00000539492 FOCADQ5VW36 1801 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 CYP2C8P10632 490 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 CCL5P13501 91 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 PTPRAP18433 802 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 ADORA1P30542 326 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 GJA8P48165 433 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 SPTY2D1Q68D10 685 aaPredicted RBP10.08□□□□□ -0.8
CD4-209ENST00000539492 ZSCAN29Q8IWY8 852 aaPredicted RBP10.08□□□□□ -0.8
CD4-209ENST00000539492 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CD4-209ENST00000539492 RNF208Q9H0X6 261 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
CD4-209ENST00000539492 AFG3L2Q9Y4W6 797 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
CD4-209ENST00000539492 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
CD4-209ENST00000539492 BTDP43251 543 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 SH3BP5LQ7L8J4 393 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 UBE2Q1Q7Z7E8 422 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
CD4-209ENST00000539492 DPF3Q92784 378 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 HTATIP2Q9BUP3 242 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
CD4-209ENST00000539492 ABCF2Q9UG63 623 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 NOB1Q9ULX3 412 aaKnown RBP10.07□□□□□ -0.8
CD4-209ENST00000539492 MROH7-TTC4A0A0A0MT08 1334 aa10.07□□□□□ -0.8
CD4-209ENST00000539492 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 SIPA1L1O43166 1804 aa10.06□□□□□ -0.8
CD4-209ENST00000539492 DDTLA6NHG4 134 aaPredicted RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 MVPQ14764 893 aaKnown RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 CHRDL2Q6WN34 429 aa10.06□□□□□ -0.8
CD4-209ENST00000539492 SMCR8Q8TEV9 937 aaPredicted RBP10.06□□□□□ -0.8
CD4-209ENST00000539492 MEIS3Q99687 375 aa10.06□□□□□ -0.8
CD4-209ENST00000539492 GABRQQ9UN88 632 aa10.06□□□□□ -0.8
CD4-209ENST00000539492 AKAP2Q9Y2D5 859 aa10.06□□□□□ -0.8
CD4-209ENST00000539492 MYH1P12882 1939 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 A0A1B0GUL7 405 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 TRIM75PA6NK02 468 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 TNPO2O14787 897 aaKnown RBP10.05□□□□□ -0.8
CD4-209ENST00000539492 ADCY3O60266 1144 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 TBC1D12O60347 775 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
CD4-209ENST00000539492 GNAI3P08754 354 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 CAPN2P17655 700 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 FLT3LGP49771 235 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 TIMM10P62072 90 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 PICALMQ13492 652 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 IRF5Q13568 498 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 PXYLP1Q8TE99 480 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 U2AF1L4Q8WU68 220 aaKnown RBP10.05□□□□□ -0.8
CD4-209ENST00000539492 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 UNC93B1Q9H1C4 597 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 CUL9Q8IWT3 2517 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 PLXNB2O15031 1838 aa10.05□□□□□ -0.8
CD4-209ENST00000539492 SRGAP3O43295 1099 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 SGPL1O95470 568 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 INHAP05111 366 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 LDHCP07864 332 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 SLURP2P0DP57 97 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 RHBDL3P58872 404 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 MECOMQ03112 1051 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 MTX1Q13505 466 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 FAM110CQ1W6H9 321 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
CD4-209ENST00000539492 COA7Q96BR5 231 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms