RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 RIOK1Q9BRS2 568 aaKnown RBP10.97□□□□□ -0.65
RTN4IP1-204ENST00000539449 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
RTN4IP1-204ENST00000539449 EPB41L4AQ9HCS5 686 aaPredicted RBP10.97□□□□□ -0.65
RTN4IP1-204ENST00000539449 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 GSG1L2A8MUP6 293 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 TRPA1O75762 1119 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 FGAP02671 866 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 DACT2Q5SW24 774 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 PODNQ7Z5L7 613 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 SLC17A8Q8NDX2 589 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 ZNF408Q9H9D4 720 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
RTN4IP1-204ENST00000539449 SZT2Q5T011 3432 aa10.96□□□□□ -0.66
RTN4IP1-204ENST00000539449 PATL2C9JE40 543 aaKnown RBP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 F8W031 263 aaPredicted RBP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 CYP21A2P08686 494 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 MCCP23508 829 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 DZIP1Q86YF9 867 aaKnown RBP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 NKX2-3Q8TAU0 364 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 IPO9Q96P70 1041 aaKnown RBP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 TACC3Q9Y6A5 838 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 SLC4A4Q9Y6R1 1079 aa10.95□□□□□ -0.66
RTN4IP1-204ENST00000539449 ECM29Q5VYK3 1845 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 FAM155AB1AL88 458 aaPredicted RBP10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 HUNKP57058 714 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 ANAPC15P60006 121 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 HAND2P61296 217 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 KIF23Q02241 960 aaPredicted RBP10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 RABEP1Q15276 862 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 ALX1Q15699 326 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 PKN2Q16513 984 aaKnown RBP10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 TBC1D22AQ8WUA7 517 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 UPF3BQ9BZI7 483 aaKnown RBP10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 TRIOBPQ9H2D6 2365 aa10.94□□□□□ -0.66
RTN4IP1-204ENST00000539449 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 MROH7-TTC4A0A0A0MT08 1334 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 USP17L3A6NCW0 530 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 USP17L4A6NCW7 530 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 RAD17O75943 681 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 APPP05067 770 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 EVX2Q03828 476 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 STRIP1Q5VSL9 837 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 USP17L1Q7RTZ2 530 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 JAKMIP1Q96N16 626 aaKnown RBP10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 INCENPQ9NQS7 918 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
RTN4IP1-204ENST00000539449 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 RPAP1Q9BWH6 1393 aaPredicted RBP10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 MYH1P12882 1939 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 GAKO14976 1311 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 CYP2D7A0A087X1C5 515 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 GPR75-ASB3A0A0A6YYF3 556 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 PSMD14O00487 310 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 LDHCP07864 332 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 BTDP43251 543 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 NEK4P51957 841 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 PPP4CP60510 307 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 FKBP1AP62942 108 aaKnown RBP10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 GSTO1P78417 241 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 KIAA0825Q8IV33 1275 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 SNX21Q969T3 373 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 TCEANC2Q96MN5 208 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 TTC14Q96N46 770 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 ADARB2Q9NS39 739 aaKnown RBP10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 LAMB1P07942 1786 aa10.92□□□□□ -0.66
RTN4IP1-204ENST00000539449 A0A0C4DFX4 3053 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 E7EWF7 191 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 CYP2D6P10635 497 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 RHBDL3P58872 404 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 CXCL9Q07325 125 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 RGMBQ6NW40 437 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 NIM1KQ8IY84 436 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 GMLQ99445 158 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms