RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 RPAP1Q9BWH6 1393 aaPredicted RBP19.09■□□□□ 0.65
RPAIN-206ENST00000539417 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
RPAIN-206ENST00000539417 FOCADQ5VW36 1801 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 FAM155AB1AL88 458 aaPredicted RBP19.09■□□□□ 0.65
RPAIN-206ENST00000539417 IGSF3O75054 1194 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 BAG3O95817 575 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 FKBP1BP68106 108 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 LDLRAD1Q5T700 205 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 MAPKAPK5Q8IW41 473 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 KBTBD3Q8NAB2 608 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 HHIPL1Q96JK4 782 aa19.09■□□□□ 0.65
RPAIN-206ENST00000539417 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
RPAIN-206ENST00000539417 AK9Q5TCS8 1911 aa19.08■□□□□ 0.65
RPAIN-206ENST00000539417 ERC2O15083 957 aa19.08■□□□□ 0.64
RPAIN-206ENST00000539417 ZNF157P51786 506 aaPredicted RBP19.08■□□□□ 0.64
RPAIN-206ENST00000539417 MAP3K11Q16584 847 aa19.08■□□□□ 0.64
RPAIN-206ENST00000539417 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
RPAIN-206ENST00000539417 LCORLQ8N3X6 602 aa19.08■□□□□ 0.64
RPAIN-206ENST00000539417 NOL10Q9BSC4 688 aaKnown RBP19.08■□□□□ 0.64
RPAIN-206ENST00000539417 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
RPAIN-206ENST00000539417 SIPA1L1O43166 1804 aa19.07■□□□□ 0.64
RPAIN-206ENST00000539417 MAGEB6P1A0A0J9YX57 407 aa19.07■□□□□ 0.64
RPAIN-206ENST00000539417 ARMC9Q7Z3E5 817 aa19.07■□□□□ 0.64
RPAIN-206ENST00000539417 RASAL3Q86YV0 1011 aa19.07■□□□□ 0.64
RPAIN-206ENST00000539417 PUS7LQ9H0K6 701 aaKnown RBP19.07■□□□□ 0.64
RPAIN-206ENST00000539417 FLT1P17948 1338 aa19.06■□□□□ 0.64
RPAIN-206ENST00000539417 FAM196BA6NMK8 535 aa19.06■□□□□ 0.64
RPAIN-206ENST00000539417 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.06■□□□□ 0.64
RPAIN-206ENST00000539417 ZSCAN29Q8IWY8 852 aaPredicted RBP19.06■□□□□ 0.64
RPAIN-206ENST00000539417 JMYQ8N9B5 988 aa19.06■□□□□ 0.64
RPAIN-206ENST00000539417 CSRNP1Q96S65 589 aa19.06■□□□□ 0.64
RPAIN-206ENST00000539417 ARMT1Q9H993 441 aa19.06■□□□□ 0.64
RPAIN-206ENST00000539417 SAP30BPQ9UHR5 308 aaKnown RBP19.06■□□□□ 0.64
RPAIN-206ENST00000539417 PRKAB2O43741 272 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 PPP1R12BO60237 982 aaPredicted RBP19.05■□□□□ 0.64
RPAIN-206ENST00000539417 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
RPAIN-206ENST00000539417 SLC10A3P09131 477 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 EVX2Q03828 476 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 UBE3CQ15386 1083 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.05■□□□□ 0.64
RPAIN-206ENST00000539417 OSBP2Q969R2 916 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.64
RPAIN-206ENST00000539417 THSD7BQ9C0I4 1608 aa19.05■□□□□ 0.64
RPAIN-206ENST00000539417 MBD4O95243 580 aa19.04■□□□□ 0.64
RPAIN-206ENST00000539417 PLCG2P16885 1265 aa19.04■□□□□ 0.64
RPAIN-206ENST00000539417 MKRN3Q13064 507 aaKnown RBP19.04■□□□□ 0.64
RPAIN-206ENST00000539417 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
RPAIN-206ENST00000539417 SEC62Q99442 399 aaKnown RBP19.04■□□□□ 0.64
RPAIN-206ENST00000539417 OSBPL3Q9H4L5 887 aa19.04■□□□□ 0.64
RPAIN-206ENST00000539417 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
RPAIN-206ENST00000539417 RNF113AO15541 343 aaKnown RBP19.03■□□□□ 0.64
RPAIN-206ENST00000539417 INPP5BP32019 993 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 GJA5P36382 358 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 SDR42E1Q8WUS8 393 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 ZKSCAN4Q969J2 545 aaPredicted RBP19.03■□□□□ 0.64
RPAIN-206ENST00000539417 FSD1Q9BTV5 496 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
RPAIN-206ENST00000539417 M0R2C6 588 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 ECE1P42892 770 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 IREB2P48200 963 aaKnown RBP19.03■□□□□ 0.64
RPAIN-206ENST00000539417 VGLL4Q14135 290 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
RPAIN-206ENST00000539417 WRNIP1Q96S55 665 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 ELP3Q9H9T3 547 aa19.03■□□□□ 0.64
RPAIN-206ENST00000539417 PHF20L1A8MW92 1017 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 USP5P45974 858 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 MAP3K9P80192 1104 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 MAP3K10Q02779 954 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 RRP1BQ14684 758 aaKnown RBP19.02■□□□□ 0.63
RPAIN-206ENST00000539417 ZSCAN25Q6NSZ9 544 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 ZNF341Q9BYN7 854 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 ZNF112Q9UJU3 913 aa19.02■□□□□ 0.63
RPAIN-206ENST00000539417 COL2A1P02458 1487 aaPredicted RBP19.02■□□□□ 0.63
RPAIN-206ENST00000539417 MYH1P12882 1939 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 SMIM22K7EJ46 135 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 ANKRD13AQ8IZ07 590 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 CCDC102AQ96A19 550 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 DNAJC18Q9H819 358 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 SNCAIPQ9Y6H5 919 aa19.01■□□□□ 0.63
RPAIN-206ENST00000539417 NAV1Q8NEY1 1877 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 NEFLP07196 543 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 GSPT1P15170 499 aaKnown RBP19■□□□□ 0.63
RPAIN-206ENST00000539417 KIF23Q02241 960 aaPredicted RBP19■□□□□ 0.63
RPAIN-206ENST00000539417 DCAF15Q66K64 600 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 APPBP2Q92624 585 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 EVI5LQ96CN4 794 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 SLC10A4Q96EP9 437 aa19■□□□□ 0.63
RPAIN-206ENST00000539417 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
RPAIN-206ENST00000539417 FRMD4AQ9P2Q2 1039 aaPredicted RBP19■□□□□ 0.63
RPAIN-206ENST00000539417 CYP2D6P10635 497 aa18.99■□□□□ 0.63
RPAIN-206ENST00000539417 SPRYD7Q5W111 196 aa18.99■□□□□ 0.63
RPAIN-206ENST00000539417 RILPL2Q969X0 211 aa18.99■□□□□ 0.63
RPAIN-206ENST00000539417 WNK4Q96J92 1243 aa18.99■□□□□ 0.63
RPAIN-206ENST00000539417 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
RPAIN-206ENST00000539417 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
RPAIN-206ENST00000539417 TRIM6-TRIM34B2RNG4 842 aa18.98■□□□□ 0.63
RPAIN-206ENST00000539417 ZFYP08048 801 aaPredicted RBP18.98■□□□□ 0.63
RPAIN-206ENST00000539417 PLCD1P51178 756 aa18.98■□□□□ 0.63
RPAIN-206ENST00000539417 SHROOM1Q2M3G4 852 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms