RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
VAMP1-206ENST00000538970 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-206ENST00000538970 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
VAMP1-206ENST00000538970 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 PHF20L1A8MW92 1017 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 PDHXO00330 501 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 MYCP01106 439 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-206ENST00000538970 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 SPTY2D1Q68D10 685 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-206ENST00000538970 C17orf99Q6UX52 265 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 SLF2Q8IX21 1173 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 TMEM106CQ9BVX2 250 aa15.47■□□□□ 0.07
VAMP1-206ENST00000538970 DDX4Q9NQI0 724 aaKnown RBP15.47■□□□□ 0.07
VAMP1-206ENST00000538970 PNMA6EA0A0J9YXQ4 647 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 MECOMQ03112 1051 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 KIF22Q14807 665 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 SCYL3Q8IZE3 742 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 ZNF384Q8TF68 577 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 NEUROD6Q96NK8 337 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 HMG20BQ9P0W2 317 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
VAMP1-206ENST00000538970 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 GPR75-ASB3A0A0A6YYF3 556 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 DDTLA6NHG4 134 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-206ENST00000538970 CXCL11O14625 94 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 GNRH1P01148 92 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 ARID4AP29374 1257 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-206ENST00000538970 MAP3K10Q02779 954 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 PICALMQ13492 652 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 ERICH6Q7L0X2 663 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 ZSCAN29Q8IWY8 852 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-206ENST00000538970 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
VAMP1-206ENST00000538970 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 PTPRAP18433 802 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 CTGFP29279 349 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 PRMT2P55345 433 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 RHBDL3P58872 404 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 NBPF11Q86T75 865 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 TMEM57Q8N5G2 664 aa15.44■□□□□ 0.06
VAMP1-206ENST00000538970 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
VAMP1-206ENST00000538970 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 A0A0G2JLL6 359 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-206ENST00000538970 G3BP1Q13283 466 aaKnown RBP eCLIP15.43■□□□□ 0.06
VAMP1-206ENST00000538970 SLC4A8Q2Y0W8 1093 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 GORABQ5T7V8 394 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 GPAT2Q6NUI2 795 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 PRRT2Q7Z6L0 340 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-206ENST00000538970 SH3TC2Q8TF17 1288 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
VAMP1-206ENST00000538970 PICK1Q9NRD5 415 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-206ENST00000538970 DOCK1Q14185 1865 aa15.43■□□□□ 0.06
VAMP1-206ENST00000538970 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
VAMP1-206ENST00000538970 ECM2O94769 699 aaPredicted RBP15.42■□□□□ 0.06
VAMP1-206ENST00000538970 CYP2C8P10632 490 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 MCAMP43121 646 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 PSMC4P43686 418 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 GSTO1P78417 241 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 TRIM47Q96LD4 638 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 AFG3L2Q9Y4W6 797 aa15.42■□□□□ 0.06
VAMP1-206ENST00000538970 CEP290O15078 2479 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
VAMP1-206ENST00000538970 MAP4K4O95819 1239 aaPredicted RBP15.41■□□□□ 0.06
VAMP1-206ENST00000538970 LDHCP07864 332 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 UQCRFS1P1P0C7P4 283 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 BCRP11274 1271 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 OSBPP22059 807 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 POLA2Q14181 598 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 FASTKD5Q7L8L6 764 aaKnown RBP15.41■□□□□ 0.06
VAMP1-206ENST00000538970 RAI14Q9P0K7 980 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
VAMP1-206ENST00000538970 SRRDQ9UH36 339 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 MAST2Q6P0Q8 1798 aa15.41■□□□□ 0.06
VAMP1-206ENST00000538970 TBC1D12O60347 775 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 SSH3Q8TE77 659 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-206ENST00000538970 PRO3102Q9H379 93 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
VAMP1-206ENST00000538970 FAM196BA6NMK8 535 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 FMNL1O95466 1100 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-206ENST00000538970 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 GADL1Q6ZQY3 521 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-206ENST00000538970 SHISA4Q96DD7 197 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 MYPNQ86TC9 1320 aa15.39■□□□□ 0.05
VAMP1-206ENST00000538970 TRIM75PA6NK02 468 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 SOX1O00570 391 aaPredicted RBP15.38■□□□□ 0.05
VAMP1-206ENST00000538970 HOXD10P28358 340 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 FCGRTP55899 365 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 ATP8B2P98198 1209 aa15.38■□□□□ 0.05
VAMP1-206ENST00000538970 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms