RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 PRDM10Q9NQV6 1147 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 SNCAIPQ9Y6H5 919 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 TCRBV5S4A2TA0A5A2 114 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 UNCXA6NJT0 531 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 ENTPD3O75355 529 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
SPARC-208ENST00000538026 TRPA1O75762 1119 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 ATP5JP18859 108 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 IREB2P48200 963 aaKnown RBP10.27□□□□□ -0.77
SPARC-208ENST00000538026 TSHZ3Q63HK5 1081 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.77
SPARC-208ENST00000538026 ANKRD13AQ8IZ07 590 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 LRRCC1Q9C099 1032 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 BOLA2Q9H3K6 86 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 AATFQ9NY61 560 aaKnown RBP eCLIP10.27□□□□□ -0.77
SPARC-208ENST00000538026 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 PHIPQ8WWQ0 1821 aa10.27□□□□□ -0.77
SPARC-208ENST00000538026 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
SPARC-208ENST00000538026 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 IGF2BP3O00425 579 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPARC-208ENST00000538026 GOLIM4O00461 696 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
SPARC-208ENST00000538026 IDH1O75874 414 aaKnown RBP10.26□□□□□ -0.77
SPARC-208ENST00000538026 IGHDP01880 384 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 LDHCP07864 332 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
SPARC-208ENST00000538026 GSTO1P78417 241 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 JAG1P78504 1218 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 EVX2Q03828 476 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 PICALMQ13492 652 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 MAGEB6Q8N7X4 407 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 OPTNQ96CV9 577 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 WRNIP1Q96S55 665 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 HAUS7Q99871 368 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
SPARC-208ENST00000538026 MYH7P12883 1935 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 SALL3Q9BXA9 1300 aa10.26□□□□□ -0.77
SPARC-208ENST00000538026 MYH1P12882 1939 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 CYP7A1P22680 504 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 CAP1Q01518 475 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 HDAC1Q13547 482 aaPredicted RBP10.25□□□□□ -0.77
SPARC-208ENST00000538026 MOGSQ13724 837 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 TEX11Q8IYF3 940 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 MIGA1Q8NAN2 632 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 TGFBRAP1Q8WUH2 860 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 BRI3BPQ8WY22 251 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 ZNF341Q9BYN7 854 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 OSBPL5Q9H0X9 879 aaPredicted RBP10.25□□□□□ -0.77
SPARC-208ENST00000538026 DNAJC18Q9H819 358 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
SPARC-208ENST00000538026 PTPRFP10586 1907 aa10.25□□□□□ -0.77
SPARC-208ENST00000538026 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 IRF6O14896 467 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 TBC1D8O95759 1140 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 ZBTB48P10074 688 aaPredicted RBP10.24□□□□□ -0.77
SPARC-208ENST00000538026 PDE6AP16499 860 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 SHROOM1Q2M3G4 852 aaPredicted RBP10.24□□□□□ -0.77
SPARC-208ENST00000538026 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
SPARC-208ENST00000538026 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 MAPKAPK5Q8IW41 473 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 DNAJC2Q99543 621 aaKnown RBP10.24□□□□□ -0.77
SPARC-208ENST00000538026 SAGE1Q9NXZ1 904 aa10.24□□□□□ -0.77
SPARC-208ENST00000538026 COL2A1P02458 1487 aaPredicted RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 CA12O43570 354 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 TBC1D12O60347 775 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 IGSF3O75054 1194 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 ADD2P35612 726 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 NOL9Q5SY16 702 aaKnown RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 ECHDC1Q9NTX5 307 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 PAG1Q9NWQ8 432 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 FLT1P17948 1338 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 ZNF532Q9HCE3 1301 aa10.23□□□□□ -0.77
SPARC-208ENST00000538026 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
SPARC-208ENST00000538026 ATAD5Q96QE3 1844 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 MANSC4A6NHS7 340 aaPredicted RBP10.22□□□□□ -0.77
SPARC-208ENST00000538026 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
SPARC-208ENST00000538026 MAP3K12Q12852 859 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 ERO1BQ86YB8 467 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
SPARC-208ENST00000538026 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 CFHR5Q9BXR6 569 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 SAP30BPQ9UHR5 308 aaKnown RBP10.22□□□□□ -0.77
SPARC-208ENST00000538026 PALD1Q9ULE6 856 aa10.22□□□□□ -0.77
SPARC-208ENST00000538026 DOCK1Q14185 1865 aa10.21□□□□□ -0.77
SPARC-208ENST00000538026 PRKAB2O43741 272 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms